Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2057 ATGGCTTTTTGCCCAATATTTTGCTGTGCAAAGGGTTCGCAACTAAAAGTGCGAGGGAAAAAAGCACCAACATGGCGAGTCTTTTCTTTGAAGGAACTCCACTCAGCTACAAATAATTTCAACTATGATAACAAGCTTGGAGAAGGGGGATTTGGCAGTGTTTACTGGGGCCAACTTTGGGATGGATCACAAATTGCGGTGAAAAGATTGAAAGCTTGGAGCACCAAAGCAGATATGGAATTTGCTGTAGAGGTTGAGATATTGGCAAGAGTACGGCACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGGCAGGAACGGCTAATTGTATATGACTATATGCCAAACTTGAGCCTACTTTCTCATCTTCACGGACAGCATTCTGCAGAATGCCTTCTTGATTGGAGCAGACGGATGACTATTGCAATTGGCTCAGCCGAGGGAATTGCATATCTTCACCACCAAGCAACACCACACATAATCCATAGAGATATCAAAGCAAGCAACGTGTTACTGGATGCAGATTTCCAAGCTCAGGTTGCTGATTTTGGTTTTGCTAAGTTGATCCCTGATGGGGCAACCCATGTGACCACAAGAGTTAAGGGAACTCTCGGCTACCTCGCGCCGGAATATGCCATGTTAGGTAAGGCATCTGAGAGTTGCGATGTCTACAGCTATGGAATTCTCCTGTTGGAACTTGCCAGTGGCAAGAGACCAATTGAAAAACTGAGCACCACAATGAAGCGATCAATAACTGATTGGGCCCTGCCATTGGTTTGTGAGAAGAATTTTGGCGAGCTTGCCGATCCGAGGCTGAAGGGTAACTACGTGAAGGATGAGCTTAAAAGGGTTGTTCTTGTTGCACTTGTGTGTGTTCAGAGTCAGCCTGAGAAGAGACCTACCATGCTTGATGTAGTAGAGCTACTGAAGGGAGAATCTAAAGATAAGTTTTTGCTGTTAGAAAACAATGAACTGTTCAAAAGCCCTCCAGCTTTAGAAAACAATGATGGGGTTTCAGTTGCTGAAGACAGCACTTCAGACTTCATCTCAGAAGAGAAGGAATCCATATATGAGAAGAAAGAGAACGGTGGGCTATAA 1104 0.4438 MAFCPIFCCAKGSQLKVRGKKAPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKAWSTKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAECLLDWSRRMTIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDADFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSYGILLLELASGKRPIEKLSTTMKRSITDWALPLVCEKNFGELADPRLKGNYVKDELKRVVLVALVCVQSQPEKRPTMLDVVELLKGESKDKFLLLENNELFKSPPALENNDGVSVAEDSTSDFISEEKESIYEKKENGGL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2057 367 ProSiteProfiles Protein kinase domain profile. 40 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2057 367 PIRSF ILK 9 317 - -
Bisa06g2057 367 Gene3D Transferase(Phosphotransferase) domain 1 116 325 - -
Bisa06g2057 367 PANTHER OS01G0253100 PROTEIN 21 316 - -
Bisa06g2057 367 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g2057 367 MobiDBLite consensus disorder prediction 348 367 - -
Bisa06g2057 367 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Bisa06g2057 367 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Bisa06g2057 367 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Bisa06g2057 367 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Bisa06g2057 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Bisa06g2057 367 MobiDBLite consensus disorder prediction 332 367 - -
Bisa06g2057 367 Gene3D Phosphorylase Kinase; domain 1 13 115 - -
Bisa06g2057 367 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2057 Bisa-ChrBisa06 64358093 64362708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2057 7 314 Trihelix Transcription Factor Family AT1G70460 47.335 9.74e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Bisa06g2057 Pkinase 7.4e-44 CL0016