Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2042 ATGCGAGACTCTCATCTGCATGGAACTCTCCACGCCACCATATTTGAGATCGATCAGCTCTGTGCTGACGACAGCGGTTTTTTCAGCATGCTTAAGCACACAATTGAGGACAAAGTTGGCGTAGGGAAGGGATCATCTCAGATCTACGCAACAGTGGATTTAGAGAAAGCAAGAGTGGGAAGAACCAGAGTGGAAAAAGCAAGGAGGGAAGGACGTGCTGATGACGCGGGAGGAGTTCAACGAGAAGCTGATTCCTCCGTCGCCGGTGACGTACCCGGAGGACGGCGAGACGTGGAATGTGCAGCTGTTCAGGTCGATCGACGGCGGGGCCGCTTTCGGGTTCCCGGAGAGCCCGGAGGAGGCGGCGAGGCTGGGGCTGGAAATCGAGAGACGCAGAAAGACGGAGAGTATCAGCCTCAGGAGAGACCAGAACCTGATTCTGGGTATGCCAAAGCCCAAGAAGCACGTCGCTTCATGATATACGTTCATACCAAGATGATGATTGTGGATGATGAGTACATAATCATCGGATCAGCAAACATAAACCAGAGATCAATGGACGGGTCGAGGGACACCGAGATAGCCATAGGGGCATACCAACCCTACCATCTGGCGACGAGCCGAGAGCCTGCAAGAGGGGACATATACGGGTTCCGAAAGGCACTGTGGTTCGAGCACTGTGGAATGATGCACGCTGTGTTTGACAGACCAGAGAGCGAAGAGTGTGTGCAGAAGATGAACCAGATGGCTGACCAGTACTGGGAAATGTATTCAAGGGATTCATGCGAGCAGGACATGCCTGGCCACTTGATGCGATATCCCATTAAGGTTTCTGAAGAAGGAAGAGTGCACCATCTCGATGGCTTCGAGTGCTTCCCTGACACACAGGCTAAGGTTCTTGGAGCCAAATCTGACTACTTGCCACCCATTCTTACTACTTGA 942 0.5255 MRDSHLHGTLHATIFEIDQLCADDSGFFSMLKHTIEDKVGVGKGSSQIYATVDLEKARVGRTRVEKARREGRADDAGGVQREADSSVAGDVPGGRRDVECAAVQVDRRRGRFRVPGEPGGGGEAGAGNRETQKDGEYQPQERPEPDSGYAKAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGSRDTEIAIGAYQPYHLATSREPARGDIYGFRKALWFEHCGMMHAVFDRPESEECVQKMNQMADQYWEMYSRDSCEQDMPGHLMRYPIKVSEEGRVHHLDGFECFPDTQAKVLGAKSDYLPPILTT 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2042 313 Pfam Phospholipase D C terminal 233 303 IPR024632 -
Bisa06g2042 313 Gene3D Endonuclease Chain A 124 205 - -
Bisa06g2042 313 SUPERFAMILY Phospholipase D/nuclease 154 243 - -
Bisa06g2042 313 MobiDBLite consensus disorder prediction 134 150 - -
Bisa06g2042 313 Pfam Phospholipase D Active site motif 159 185 IPR001736 GO:0003824
Bisa06g2042 313 PANTHER PHOSPHOLIPASE D 127 301 IPR015679 -
Bisa06g2042 313 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 158 185 IPR001736 GO:0003824
Bisa06g2042 313 SMART pld_4 158 185 IPR001736 GO:0003824
Bisa06g2042 313 MobiDBLite consensus disorder prediction 60 79 - -
Bisa06g2042 313 MobiDBLite consensus disorder prediction 60 95 - -
Bisa06g2042 313 MobiDBLite consensus disorder prediction 107 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2042 Bisa-ChrBisa06 63932359 63936553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2042 1 63 Phospholipase D Gene Family (Wang group) AT1G52570 56.923 6.98e-16 76.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1899 10 51540704 51544649 Bisa06g2042 06 63932359 63936553 CCT
Bisa06g2042 06 63932359 63936553 Bisa10g1899 10 51540704 51544649 ECH
Bisa09g1196 09 17202641 17206654 Bisa06g2042 06 63932359 63936553 ECH
Bisa06g2042 06 63932359 63936553 Bisa06g2042 06 63932359 63936553 ECH