Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g2041 ATGGTGCAATCAAAGAAGTTCAGAGGTGTGAGGCAACGTCACTGGGGCTCTTGGGTCTCTGAGATTCGCCATCCATTGTTGAAAAGAAGGGTGTGGCTTGGGACGTTTGAGACTGCAGAAGCGGCGGCGAGAGCATATGACGAAGCGGCGATTTTGATGAGTGGTAGAAACGCCAAAACGAACTTCAATTACGATTATCGAATGGGGAATCATCACATTACTTCTTCTTCGTCTTCTTCTTCTTCTTCTTTTTCTTCCTCGTCTTTCTCTGAAGCTCTGAGTGCGAAGCTTCGCAAGTGCTGTAAGTCCCCATCGCCGTCGCTGACTTGCCTGAGGCTCGACACAGAGAACTCCCACATCGGAGTGTGGCAGAAGCAAGCGGGGCCTCGCTCCGACTCCAACTGGGTCATGATGGTCGAGCTCGAAAGGAAGAATCTTGCGGGCTCTGAGACGTCGATGTTGCCGGTGGCGGCGAAGCCGGAGAAGGTGAAGCCGGAGGAAGGAAACGGGAATGGAGGGTTGGATGAAGAACAGAGGCTCGCGTTGCAGATGATAGAGGAACTGCTCAATAGGAACTAG 579 0.5233 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDEAAILMSGRNAKTNFNYDYRMGNHHITSSSSSSSSSFSSSSFSEALSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKQAGPRSDSNWVMMVELERKNLAGSETSMLPVAAKPEKVKPEEGNGNGGLDEEQRLALQMIEELLNRN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g2041 192 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Bisa06g2041 192 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 144 - -
Bisa06g2041 192 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Bisa06g2041 192 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bisa06g2041 192 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bisa06g2041 192 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Bisa06g2041 192 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Bisa06g2041 192 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Bisa06g2041 192 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bisa06g2041 192 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g2041 Bisa-ChrBisa06 63918129 63919736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g2041 1 192 AP2-EREBP Transcription Factor Family AT1G15360 62.136 1.05e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa06g2041 AP2 5.3e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g2041 06 63918129 63919736 Bisa06g2041 06 63918129 63919736 ECH