LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa06g2021	ATGGAATATTTACATATAGAATGTACAAGAAAATGGTATTGGACTGACTCTACAGAGTATGCTATTCTGGAAATGACCCTAAATGTTGTATTCTGCGAGTGCAAGCCCTTACCTGCAACTCAAAGGCATAACCAGAGGCCCCATCGGGCAAACCAGCCAGCGTGGAAAGCAATAAAGCAGCTCTACTCCGAGCACGGCGAGGTCAGACTAGACCACCTCCACCTCCTGGGCCGCCTCGGCTCCGGCGGCACCGGACACGTGTTCCTCTGCGAGATCAAACAACAACACAGTACGCCGTCGTCCTCGTCGTCAAAGGATCAGTATTGTGGTGGCTGTTACTATGCGTTGAAAGTGGTGGATACAGACTGTACGAAAGTGAAGAAGGAGAATGTGAAGAGGGCTCAGATGGAGAGACGAGTGTTGAGTGTGCTTGACCACCCTTTTCTTCCTACGCTTTATGCCACCTTCGAGGCTTATCACTACTCCTGCTTCCTCATCGATTACTGCCATGGCGGTGACCTCTTCACACTCCAACAGCAACAGCCTAATCTTCGCTTCACCATCTCTACGGCTAAATTCTATGCAGCAGAAGTGCTGGTAGCTCTTGAATATCTGCACATGAAGGGCATAATATACAGAGACCTAAAGCCAGAAAACGTGCTGATTCAAGAAGATGGCCACGTCATGCTCTCCGACTTCGATCTCTCGCTTTACTGTAAGACCCACCCCAAGCTTCTCATTCACGACACCACCACGAGGAAGAAGAAGACGAAGAAGAAGAGTCCATTGTTCTGCTGCGAAAACGACGACGTAACGGAGAGGAGGAGCAAAAGGTCAGGGTCAGCCATGGCTGACGTGGACATGGAAGTATCAGCTGAACCAATGAGCGCGAGGTCCACGTCATTCGTGGGGACCCACGAGTACTTGGCGCCGGAGGTGATTCTGGGGGAGGGCCACGGGGCCGCAGTGGATTGGTGGGCGTACGGGGTGTTCCTCTACGAGCTGCTGTACGGGATCACGCCCTTCAAGGACAAGGACAACGCCGGGACGATGAGGAACATCGTGGGGATGGGGAAGTCGAAGTTGAGGTTCCCGAGACGAGAAGTTGGGGACGAGAAGGAAGGGGAGAATGAGAATCTCATGAAGGCGCACGACCTCATAAGAAAGCTTCTCGTGAGAAATCCCGAGAAGAGAACGGGGTACGCGAGAGGGTCTTGCGAGATTAAGAAGCACCAGTTTTTCGAGGGGGTAAATTGGGCCCTGATTAGAACGGTGAAGCCTCCCATTGTTCCTCGAGATGAGAATTACGATATTTCGTGGTTATCGAGCGTCAAGCAGAAAGATACAGTGGACGCGCCTTATCAGATTACTGACTTCTTCTAG	1383	0.5155	MEYLHIECTRKWYWTDSTEYAILEMTLNVVFCECKPLPATQRHNQRPHRANQPAWKAIKQLYSEHGEVRLDHLHLLGRLGSGGTGHVFLCEIKQQHSTPSSSSSKDQYCGGCYYALKVVDTDCTKVKKENVKRAQMERRVLSVLDHPFLPTLYATFEAYHYSCFLIDYCHGGDLFTLQQQQPNLRFTISTAKFYAAEVLVALEYLHMKGIIYRDLKPENVLIQEDGHVMLSDFDLSLYCKTHPKLLIHDTTTRKKKTKKKSPLFCCENDDVTERRSKRSGSAMADVDMEVSAEPMSARSTSFVGTHEYLAPEVILGEGHGAAVDWWAYGVFLYELLYGITPFKDKDNAGTMRNIVGMGKSKLRFPRREVGDEKEGENENLMKAHDLIRKLLVRNPEKRTGYARGSCEIKKHQFFEGVNWALIRTVKPPIVPRDENYDISWLSSVKQKDTVDAPYQITDFF	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa06g2021	460	Gene3D	Transferase(Phosphotransferase) domain 1	287	432	-	-
	Bisa06g2021	460	SUPERFAMILY	Protein kinase-like (PK-like)	50	444	IPR011009	-
	Bisa06g2021	460	Pfam	Protein kinase domain	111	244	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g2021	460	Pfam	Protein kinase domain	298	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g2021	460	Gene3D	Transferase(Phosphotransferase) domain 1	169	237	-	-
	Bisa06g2021	460	ProSiteProfiles	Protein kinase domain profile.	73	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g2021	460	Gene3D	Phosphorylase Kinase; domain 1	72	168	-	-
	Bisa06g2021	460	PANTHER	FLIPPASE KINASE 1-RELATED	41	437	-	-
	Bisa06g2021	460	SMART	serkin_6	73	414	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g2021	460	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	210	222	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa06g2021	Bisa-ChrBisa06	63672760	63677450	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa06g2021	43	460	AGC Kinase Gene Family	AT2G26700	45.306	8.17e-134	394

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Bisa06g2021		Pkinase	2.2e-30	CL0016