Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1992 ATGGCTCCTCTTGGACTTGAGATCACAGAGCTGAGGTTGGGGCTTCCCGGAGGAGATAATTGTGTGGATAGGAGTGGTGAGACGTCGTCGACGAAGAAGAGAGTGTTCTCGGAGATTGGCGGTGGCGGGGGCGAGGAGGGTGAGAATAGCTGCTCCGGTGACTGGAAAATACCACCGGCAAAGAACCAGGTCGTCGGATGGCCGCCAGTGTGCTCGTACCGGAGGAGGAGCATGAGTGATGATCAGGGGTCAAAAATGTACGTGAAGGTTAGTATGGATGGGGCTCCTTTCTTGCGTAAGGTTGATTTGTCTATGCAAAAGGGGTACTCTGAGTTAGCTTCTTCCTTGGAGAAGCTCTTTGACTGTCATGGAATCGGAGAGGCATTGAAGGGTATGGACACTTCTGAACACGTTCCCATTTATGAGGACAGGGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAGATGTTTATTGATTCATGCAAGAGGCTGAGGATTATGAAAAGGTCAGAGGCGAAAGGCTTCGACCTGCAACCAAAAGGGTCACTGAAGGGATTCATAGGAGGCAAATCGAAGTGA 585 0.5094 MAPLGLEITELRLGLPGGDNCVDRSGETSSTKKRVFSEIGGGGGEEGENSCSGDWKIPPAKNQVVGWPPVCSYRRRSMSDDQGSKMYVKVSMDGAPFLRKVDLSMQKGYSELASSLEKLFDCHGIGEALKGMDTSEHVPIYEDRDGDWMLVGDVPWEMFIDSCKRLRIMKRSEAKGFDLQPKGSLKGFIGGKSK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1992 194 Gene3D - 80 182 - -
Bisa06g1992 194 ProSiteProfiles PB1 domain profile. 85 173 IPR000270 GO:0005515
Bisa06g1992 194 Pfam AUX/IAA family 54 177 IPR033389 -
Bisa06g1992 194 SUPERFAMILY CAD & PB1 domains 76 170 - -
Bisa06g1992 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 175 IPR003311 GO:0005634|GO:0006355
Bisa06g1992 194 MobiDBLite consensus disorder prediction 21 55 - -
Bisa06g1992 194 FunFam Auxin-responsive protein 80 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1992 Bisa-ChrBisa06 63141232 63144046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1992 83 175 B3 DNA Binding Superfamily AT4G23980 41.935 2.72e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa06g1992 AUX_IAA 1e-45 CL0072