Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1991 ATGTCACCGGAGAGTAGTAGCACCTGCACCACCACCCACTCCGCCCAATCCGACGTCGTCGAGATGAACCTCAAGGAGACTGAGACTGAGACTGAGCTCACCCTTGGCCTTCCCGGCACCACAATAACTGCCTCCAAACGACGTCGCTTCTCGGAAGCCAATGCTTTTGGCTCAACATCTTCCTTATCTAACGCGCCCGCACCGAAGGTACAGACGGTGGGGTGGCCGCCGGTGAGGGCGAGTAGGAAGAACGCCATGAGTGGATGGAAGTACGTGAAGGTGGCGGTGGACGGAGCTCCATATCTTAGAAAGGTGGATCTCGAGACGTACGAGAGCTATGATCAGCTGCTCCTGGGCTTAGAGTCCATGTTTTCTTGCTTCACCATTCGTAATGATTTGAATGAGACGAAGCTAATGGACTTGGGGAATGGGGCTGAATACGTGCCCACCTACGAGGACAAAGATGGCGACTGGATGCTGGTCGGAGATGTACCCTGGAAGATGTTTGTTAAATCATGCAAGAGAATCAGGCTGATGATGAAGTCAGAGGCCACTGGCCTAGAGGCTTTTCTGCTAATTTTGATGTCCCCTGCCGATCTTCCATGTGAACGCTGA 615 0.5317 MSPESSSTCTTTHSAQSDVVEMNLKETETETELTLGLPGTTITASKRRRFSEANAFGSTSSLSNAPAPKVQTVGWPPVRASRKNAMSGWKYVKVAVDGAPYLRKVDLETYESYDQLLLGLESMFSCFTIRNDLNETKLMDLGNGAEYVPTYEDKDGDWMLVGDVPWKMFVKSCKRIRLMMKSEATGLEAFLLILMSPADLPCER 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1991 204 FunFam Auxin-responsive protein 84 191 - -
Bisa06g1991 204 Gene3D - 83 192 - -
Bisa06g1991 204 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 28 185 IPR003311 GO:0005634|GO:0006355
Bisa06g1991 204 Pfam AUX/IAA family 90 187 IPR033389 -
Bisa06g1991 204 Pfam AUX/IAA family 42 87 IPR033389 -
Bisa06g1991 204 ProSiteProfiles PB1 domain profile. 89 183 IPR000270 GO:0005515
Bisa06g1991 204 SUPERFAMILY CAD & PB1 domains 81 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1991 Bisa-ChrBisa06 63122439 63125053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1991 49 184 B3 DNA Binding Superfamily AT1G34410 29.412 9.47e-10 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa06g1991 AUX_IAA 1.1e-46 CL0072