Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1947 ATGGGTTTTGTTAGTGTGGTTCTGCTTCTACTTCTTGCCGGTACAGTAGCAGCAAGGTTCCAATGCGGCTCAATCGAAACAACGTGCCGATCCCTGGCTGCTTACAACGCCACAAAGCGCACCACTTACGGTGCAGTCCAAACCCTGTTCAACGTGAGCCGGCTGAGTGATATCCTGGCGGCGAATGGCCTTCCTGAGTCCACCGTACAGGACGATGCGGTGGATTTGAGGCAGATAATCCGGATCCCTTTGGACTGCGAGTGCTATTATCAATCTTCCGGATACTTAACGGGTCGGACGAAAAACCCGCCCATTTACAAAATACGCGCAAACGACACGCTGTACTTGGTAGGACTTTATGAGTTCTCCGGTTTGGTGAGTTTCCAGGATATCGAAGACGCTAATCCTGAGGCGAAGCCATTGAACTTGGCGATAGGAGAGGAGGTGAAGATTCCGCTGCCGTGCGGGTGCGGGCCGGTGGAGGGGAAGAGCGTGGTTCACTGTGGGATGGGGCTGGAATACGGGACTACCTTGGACCAGATAGCTCAGGAGTATGGCATCACCTCTGATTCCATCTTGTCCGCCAATGGGTTTCGTGTTCCCACCGAACTTACCACCACTCAGCCTATCGATATTCCTCTTCCAGCTTGTTCCTCGATGGTGAGAAAAGACTCCTTGGACTACCCTTTGCTTGTTCCAAATGGGTCTTATGTCTACACCGCAAATGGCTGCGTCAAGTGCAAGTGTGATGCCACCAACAACTGGATATTACAGTGTGAGCCATCCAACCTTAAACCAACCAACTGGTCTACTTGCCCATCTATGCAATGCAACAGTTCAGGCAACATGTCCATTGGCAACACAACACCCTCAGGTTCCCACAATCTCACAGTCTGTGCCTATGCTGGTTATAGAAGTCAAACCATCTTCACTACTCTTGCAACTGTGCCTGTGCCCACTCCTGATTCCAGGAGGGCTCGTGATGATGCTAGGAATGACAAGAAAGGCAGGTGGTGGATATGGCTCGTTGTGGTAGGAGGAGTTATTGCTGTACCAACGTTGTGCTACTTATGTTGCTTAATGTGCAGAAAATATAAAACAGAAGTTGACAGAAAGAGGAAGCAAAAGAAGCTTATATGGGAAATTGGAGGCGGTACATTAGCTACCGCTTTATATCGCAAAGCAAAAAGAAATAGCAAAAATGGCAAAACAAACCATGAAATGCAGATATTCAGCTTTGAGAGCATTGTTGCTGCCTCAGACAATTTTTCTGTTGCAAACGAGTTAGGAGAGGGTGGCTATGGACCTGTTTATAAGGGGCAATTGGCTGATGGACGGGAAATAGCAATAAAAAGACTTTCCAGTAAATCAGGGCAAGGGTTGGTGGAGTTCAAAAATGAAGTTAAACTTATAGCAAAACTTCAGCATACAAATTTAGTAAAGCTTCTGGGGTTTTGCATTCAAAATGAAGAAAGGATCTTAATCTATGAATACATGCCCAACAAAAGTTTAGATTATTATCTCTTTGATTCTGACAAAAGAAATACAATAATATGGGAAAGAAGGTTCAACATCATTCAAGGGATTGCTCATGGATTGGTTTATCTCCATCATTTTTCAAGATTGAAAGTAATTCATCGAGATTTGAAAGCTAGCAACATATTACTTGATTTTGAGATGAACCCAAAAATTAGTGATTTTGGCATGGCAAGAATATTTGAGTTGAAAGGAATGGAAGAGAATACCAATAGAATTGTTGGAACATATGGTTACATGTCTCCGGAGTATGCAATGAGTGGTGTTGTCTCACTGAAGACTGATGTGTTTAGCTTCGGAGTCTTAGTGCTTGAGATTGCCAGTGGGAAGAAAAATAATTCTTGCTATCATTATGACTACCCAATCAACCTAATAGGATTTGCATGGAAGCTGTGGAATGAAAATAGAGGTGTACAGATTATAGACTCTTCATTGCTTGAATCTTGTGATACTGCTAAAGTACTGAGATGCATTCAAGTGGGTCTATTATGTGTACAGGACCGAGCAACAGATAGGCCAAGCATGTTGGAGGTTATTTCAATGCTTTCAAATGAAACCATCCTGCTTCCTACTCCTAAACAGCCTGCATTTTCCTATGTAAATGTCTCAGATGAATTAAATGATTCACAACCTTGTTCAACCAATAGGGTTACAATATCTGTAATGGATGCCAGATAA 2214 0.4372 MGFVSVVLLLLLAGTVAARFQCGSIETTCRSLAAYNATKRTTYGAVQTLFNVSRLSDILAANGLPESTVQDDAVDLRQIIRIPLDCECYYQSSGYLTGRTKNPPIYKIRANDTLYLVGLYEFSGLVSFQDIEDANPEAKPLNLAIGEEVKIPLPCGCGPVEGKSVVHCGMGLEYGTTLDQIAQEYGITSDSILSANGFRVPTELTTTQPIDIPLPACSSMVRKDSLDYPLLVPNGSYVYTANGCVKCKCDATNNWILQCEPSNLKPTNWSTCPSMQCNSSGNMSIGNTTPSGSHNLTVCAYAGYRSQTIFTTLATVPVPTPDSRRARDDARNDKKGRWWIWLVVVGGVIAVPTLCYLCCLMCRKYKTEVDRKRKQKKLIWEIGGGTLATALYRKAKRNSKNGKTNHEMQIFSFESIVAASDNFSVANELGEGGYGPVYKGQLADGREIAIKRLSSKSGQGLVEFKNEVKLIAKLQHTNLVKLLGFCIQNEERILIYEYMPNKSLDYYLFDSDKRNTIIWERRFNIIQGIAHGLVYLHHFSRLKVIHRDLKASNILLDFEMNPKISDFGMARIFELKGMEENTNRIVGTYGYMSPEYAMSGVVSLKTDVFSFGVLVLEIASGKKNNSCYHYDYPINLIGFAWKLWNENRGVQIIDSSLLESCDTAKVLRCIQVGLLCVQDRATDRPSMLEVISMLSNETILLPTPKQPAFSYVNVSDELNDSQPCSTNRVTISVMDAR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1947 737 CDD STKc_IRAK 429 694 - -
Bisa06g1947 737 Pfam Domain of unknown function (DUF3403) 696 737 IPR021820 GO:0004674
Bisa06g1947 737 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 280 737 - -
Bisa06g1947 737 ProSiteProfiles Protein kinase domain profile. 423 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1947 737 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 388 498 - -
Bisa06g1947 737 Gene3D Phosphorylase Kinase; domain 1 396 498 - -
Bisa06g1947 737 SMART serkin_6 423 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1947 737 Gene3D Transferase(Phosphotransferase) domain 1 499 700 - -
Bisa06g1947 737 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase CES101 isoform A 499 699 - -
Bisa06g1947 737 Pfam Protein tyrosine and serine/threonine kinase 425 693 IPR001245 GO:0004672|GO:0006468
Bisa06g1947 737 Pfam LysM domain 177 213 IPR018392 -
Bisa06g1947 737 SMART LysM_2 105 152 IPR018392 -
Bisa06g1947 737 SMART LysM_2 173 213 IPR018392 -
Bisa06g1947 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Bisa06g1947 737 SUPERFAMILY Protein kinase-like (PK-like) 406 721 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1947 Bisa-ChrBisa06 62517480 62522669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1947 392 716 Receptor kinase-like Gene Family AT4G11480 54.294 5.17e-122 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa06g1947 PK_Tyr_Ser-Thr 7.2e-44 CL0016