Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1944 ATGTTGGATCAACTGGCGGGAATAATATGGGAGGCTGCGAAGTGTTTGTGTGGTCGGGCCAACGAAGAAGTTTCTTATATTAATGATTTGGAGGAGAATCTGAGGTCATTGAAAGACAAATGGGAAGAGCTTCAAAGAAAGAGACAAGATTTGCAGACAAGAGTTGATGAAGCTGAATACACCAGAGAAATGCAAAGGACACAAGAAGTTGATGGATGGATGAAAAAGGTTGATGCTATTCAAGAGGGAATAGAAGTCATTGAAGTTCAAGGAGACCAAGAAGTTCAGAACAAATGCTTAAGTAAATGTTGTCCAAAGAATTGCATGTCAAGTTACAAGTCAGGAAAAGACGTTGTTGAAATACTCAAGAATGTAAATGAACTAATAACTAAGGGGGAAAATTTTGCTAGCAAAGATGTTGAAATTGCTCACAAGCTACCACCTAGGCCTATAGAGATGCCTCTTGACAAGACAATAGGGTTGGATTGGATGTTTGATAAGGTGTGGAATAGTATTGAAGAAGACAATGTTGGGGTGATTGGCTTATATGGGATGGGTGGGGTGGGGAAGACTACCCTTTTGAAGAGAGTTAACAATGAGCTTAGGAAGAAAATGTCAGATTTTGATGTTGTGATATGGGTGGTGGTATCCAAAGATCCTAACTTGGATAGTATTATAGACAATATCAGAAAATTGATAGGGGTTAGAGATGACTTCTGGAATCATTGTAGCCTTCGAGAACAAAAAGTTGCAAAGATTTATGAAGTCCTAAAAGGAAAGAAATTTGTTCTTTTATTGGATGATATATGGCAAATATTGGACTTGTACAAGGTGGGAGTGCCACATCCTAAGGACACTAATTTTCAATCCAAAGTGTTATTTACAACACGACTTGAGGATGTGTGTGCAAAAATGCAAGCTCAAAAAACATTCAAAGTAGAAATTTTGAGAGAGAAAGAAGCATTAGAGTTATTTTGCATGAAGGTTGGTGAGGAAACTCTAAAGGCACACCCTATTATACCAAAGCTAGCAAAGGACATGGCTAGAGAATGTAAGGGACTTCCACTTGCATTAACAGTAGTCGGGATAGCCATGGCTGGTGTGAAGAGTGTGGAAACATGGAAATACTCAAAAAATTACTTAACAAGTTCTCCACAGACAGCTCCAAATTTGGAGATGGAAGTGTTTTCCATCCTTAAGTTTAGTTATGACCAATTGCCAGATGACACACACAAAAATTGTTTCTTATATTGTGCATTATACCCAGAAGATTATGAGATTAGTGTTCTTGGTCTTATTGATAAATGGATGGCAAATGGATTCCTTGATAAAGAAGTTGCAAAGAGCATACAAGACATTTGTGGTCACGGTGAGGCTGTGATTGAAAAGTTAAAGCAATCGTGCTTGTTGGAAAGTGTTGAAGATGATCTTTTTATGAGTCGCACAGTTAAAATGCATGATGTTATTCGAGACATGGCATTGTGGTTAGCACGTGATCAAGATAAAAACAAGAAAAAGATTTTAGTAGAAGGAGATGCATTGGCAGTGTCTCAGGATGATGTTGAAACATGGAAAATTGTCGAGAGGATTTCAGTCATGCAACACAGTTGCCTTTCTCATTGA 1623 0.3802 MLDQLAGIIWEAAKCLCGRANEEVSYINDLEENLRSLKDKWEELQRKRQDLQTRVDEAEYTREMQRTQEVDGWMKKVDAIQEGIEVIEVQGDQEVQNKCLSKCCPKNCMSSYKSGKDVVEILKNVNELITKGENFASKDVEIAHKLPPRPIEMPLDKTIGLDWMFDKVWNSIEEDNVGVIGLYGMGGVGKTTLLKRVNNELRKKMSDFDVVIWVVVSKDPNLDSIIDNIRKLIGVRDDFWNHCSLREQKVAKIYEVLKGKKFVLLLDDIWQILDLYKVGVPHPKDTNFQSKVLFTTRLEDVCAKMQAQKTFKVEILREKEALELFCMKVGEETLKAHPIIPKLAKDMARECKGLPLALTVVGIAMAGVKSVETWKYSKNYLTSSPQTAPNLEMEVFSILKFSYDQLPDDTHKNCFLYCALYPEDYEISVLGLIDKWMANGFLDKEVAKSIQDICGHGEAVIEKLKQSCLLESVEDDLFMSRTVKMHDVIRDMALWLARDQDKNKKKILVEGDALAVSQDDVETWKIVERISVMQHSCLSH 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1944 540 Gene3D - 403 494 IPR036388 -
Bisa06g1944 540 PRINTS Disease resistance protein signature 351 365 - -
Bisa06g1944 540 PRINTS Disease resistance protein signature 179 194 - -
Bisa06g1944 540 PRINTS Disease resistance protein signature 256 270 - -
Bisa06g1944 540 Gene3D - 315 402 IPR042197 -
Bisa06g1944 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 418 IPR027417 -
Bisa06g1944 540 FunFam Probable disease resistance protein At1g61300 144 310 - -
Bisa06g1944 540 Coils Coil 20 61 - -
Bisa06g1944 540 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 502 - -
Bisa06g1944 540 FunFam Probable disease resistance protein At5g66910 315 402 - -
Bisa06g1944 540 FunFam Probable disease resistance protein At1g63360 403 495 - -
Bisa06g1944 540 Gene3D - 156 313 IPR027417 -
Bisa06g1944 540 SMART AAA_5 176 335 IPR003593 GO:0016887
Bisa06g1944 540 Pfam NB-ARC domain 164 404 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1944 Bisa-ChrBisa06 62447025 62451400 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1944 176 421 WRKY Transcription Factor Family AT5G45050 24.812 1.28e-06 49.7