Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1931 ATGGCTTCACCGTCTTCGGAGACATATAATCCGCCAGCTCCGACACCCTCTGCGCCGTTTTCGGACCCAATTGATCTACTATATCCGCCACCCAGCCACACCCCTTCTCCTGCGCCGGCACCTTCTGCGCCTTTGCTGTCCCCGGCGCCCTCTCTGTCTGTGCCGTCGCTGCCACATCTAGGTGAGCCGCTGTCGCCGTTGCCAGAACCTCCGGCAGGAAGGCCGAGGGGTACGGTAACCGGACTAGTTTTAGGGACTGTCTGTGGTTCGCTGCTTATGCTGGTTCTTGTGGGTATTTGCACCTTTTTCTATATAAGGAGTAAACGAAGGATGAAACGAAATAGATTGGACAACGACTCTTCTGCTTCTCCACAAGGAACAAAAGCTGATGAGTTTGGTGATCCGCCTCATCACTTGCAAGGGACTAGTCCTCCTCCAACAGGTGGTGGATTAACATCGCTTCCAAAGCCTACTTCACCGCATGGAGTTGGGTTGAATCAGCAATCGTCATCCAGTAATGTTCATTCTACAACCAGCACAAGTTTGGAATCTCAGAGGCCATACCCATCTCCTGCTATGTCCTTGGGACTGTCACATAGCACTTTTACATATGAAGAATTAGCATTTGCAACAAATATATTCTCAGACTCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTTCATAAAGGAGTCCTCCCAAATGGAAGAAGTGTTGCAATTAAGCAGCTGAAATCGGGGAGCAGACAAGGGGAGCGTGAGTTCCAGGCTGAAGTTGAGGTCATTAGCCGAGTCCATCACAGGCATCTTGTTTCCCTAGTAGGATATTGTATTACCGGGGACCAGAGAATGCTTGTTTATGAGTTTGTCTCAAATAATACACTAGAATTCCATTTGCATGGAAAGGACAGACCAACCATGGACTGGCCTACAAGGATGAAAATTGCTTTTGGATCTGCAAAAGGATTGGCATACTTGCATGAGGATTGTGATCAACCCAAAATCATACACCGTGACATCAAGGCATCTAACATTCTTCTTGATGATAAATTTGAGGCAAAGGTTGCTGATTTTGGACTTGCCAAATTTTCATTTGACACTGATACCCATGTCTCTACTCGAGTAATGGGAACCTTTGGATACTTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACTGAGAAGTCAGATGTCTTCTCCTTTGGTATTGTGCTCTTGGAGTTGATTACAGGACAAAAGCCTGTTGATGAATCTGAGTCTTTCACAGATAACAGTATGGTTGAGTGGGTAAGACCTTTACTCTCCCAAGCTTTGGAAAGTAAGAACTTTGACGCTCTCGCGGATCCAAGGTTGCAGAAGTGTTACAACTCTAACGAGATGGTTCGAATGATTGCTTGTGCAGCAAATTGCATTCGCTATTCAGCTAAGCGTCGACCTCGAATGAGCCAGGATAGTTCGTTGGGTATGCCATTTTCTTTTGACCTCAATCCATCAGCCACAACATTATTTCTCTTTCGCAAGAAATCCTCATCACTATCTACACTGTAG 1548 0.4612 MASPSSETYNPPAPTPSAPFSDPIDLLYPPPSHTPSPAPAPSAPLLSPAPSLSVPSLPHLGEPLSPLPEPPAGRPRGTVTGLVLGTVCGSLLMLVLVGICTFFYIRSKRRMKRNRLDNDSSASPQGTKADEFGDPPHHLQGTSPPPTGGGLTSLPKPTSPHGVGLNQQSSSSNVHSTTSTSLESQRPYPSPAMSLGLSHSTFTYEELAFATNIFSDSNLLGQGGFGYVHKGVLPNGRSVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCITGDQRMLVYEFVSNNTLEFHLHGKDRPTMDWPTRMKIAFGSAKGLAYLHEDCDQPKIIHRDIKASNILLDDKFEAKVADFGLAKFSFDTDTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGIVLLELITGQKPVDESESFTDNSMVEWVRPLLSQALESKNFDALADPRLQKCYNSNEMVRMIACAANCIRYSAKRRPRMSQDSSLGMPFSFDLNPSATTLFLFRKKSSSLSTL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1931 515 MobiDBLite consensus disorder prediction 1 73 - -
Bisa06g1931 515 SMART serkin_6 214 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1931 515 Gene3D Phosphorylase Kinase; domain 1 173 289 - -
Bisa06g1931 515 MobiDBLite consensus disorder prediction 9 48 - -
Bisa06g1931 515 MobiDBLite consensus disorder prediction 145 188 - -
Bisa06g1931 515 SUPERFAMILY Protein kinase-like (PK-like) 191 483 IPR011009 -
Bisa06g1931 515 ProSitePatterns Protein kinases ATP-binding region signature. 220 242 IPR017441 GO:0005524
Bisa06g1931 515 MobiDBLite consensus disorder prediction 114 192 - -
Bisa06g1931 515 ProSiteProfiles Protein kinase domain profile. 214 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1931 515 Pfam Protein tyrosine and serine/threonine kinase 218 481 IPR001245 GO:0004672|GO:0006468
Bisa06g1931 515 FunFam proline-rich receptor-like protein kinase PERK8 290 487 - -
Bisa06g1931 515 FunFam proline-rich receptor-like protein kinase PERK1 192 289 - -
Bisa06g1931 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Bisa06g1931 515 Gene3D Transferase(Phosphotransferase) domain 1 290 487 - -
Bisa06g1931 515 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 92 483 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1931 Bisa-ChrBisa06 62091405 62101055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1931 66 496 Trihelix Transcription Factor Family AT1G68690 51.270 4.53e-142 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa06g1931 PK_Tyr_Ser-Thr 2.6e-47 CL0016