Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1930 ATGGAATCACCGTATCCGGAGATATCTCCGCCAGCTCCGACAGTCAGATACAGCTCTATTTCTCTGCCGCCAGAGACAACCCTTTACACCTCCACGCCGCCCTCTGCGACGCCGCCCTCTTATCCGGGGACACCTCTGCCAGCGACAACCCCTTACCCTTCCACGCAGCCCTTTGCTATGCCACCTGCGACTGGGGCGTCGCTGACGCCGTCGCCGCCGCCGGCGAGAATGCAGAAGGGTATGCTAGCCGGACTCGTTGCCTGTGGTTTGCTAGTTCTTGTGGGTATTTGCGCCTTTTTCTATATAAGGAGTAAACGAAGGATGAAACGACATAAATTGGACAACAACTCTTCCGCTTCTCCACAAGGACCAAAAGCTGATGAGTTTGGTGATCCACCTCATCACTTGCAAGGGACTAGTCCTCCTCCAGCAGGTGGTGGATTAACATCGCTTCCAAAGCCTACTTCACCTCATGGAGTTGGGTTGAATCAGCAATCGCCATCCAGTAATGTTCATTCTACAACCAGCATAAGTTTGGAATCTCAGAGGCCATACCCATCTCCTGCTATGTCCTTGGGACTGTCACAAAGCACTTTTACATATGAAGAATTAGCATTTGCAACAAATACATTCTCAGACTCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTTCATAAAGGAGTCCTCCCAAATGGAAAAAGTGTTGCAATTAAGCAGCTGAAATCGGGGAGCAGACAAGGGGAGCGTGAGTTCCAGGCTGAAGTTGAGGATTTAGTAAGGTTCCAGGTTGCTGATTTTGGACTCGCCAAATTTTCATTTGACACTGATACCCATGTCTCTACTCGAGTAATGGGAACCTTTGGATACTTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACTGAGAAGTCAGATGTCTTCTCCTTTGGTGTTGTGCTCTTGGAGTTGATTACAGGACGAAAGCCTGTTGATAAATTTGAGTCTTTCACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTCTCCCAAGCTTTGGAAAGTAAGAACTTTGACGCTCTCGCAGATCCAAGATTGCAGAAGAGTTACAACTCTGACGAGATGGTTCGAATGATTGCTTGTGCTGCAAATTGCGTTCGCCATTCAGCCAGGCGTCGGCCTCGAATGAGCCAGGTTAGTGAACCAACCGTAGAGATATGTTTTAATATCAGTTCTCTGTTCTTTTCTATGGCTGAACAGCTTTAG 1248 0.4792 MESPYPEISPPAPTVRYSSISLPPETTLYTSTPPSATPPSYPGTPLPATTPYPSTQPFAMPPATGASLTPSPPPARMQKGMLAGLVACGLLVLVGICAFFYIRSKRRMKRHKLDNNSSASPQGPKADEFGDPPHHLQGTSPPPAGGGLTSLPKPTSPHGVGLNQQSPSSNVHSTTSISLESQRPYPSPAMSLGLSQSTFTYEELAFATNTFSDSNLLGQGGFGYVHKGVLPNGKSVAIKQLKSGSRQGEREFQAEVEDLVRFQVADFGLAKFSFDTDTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDKFESFTDDSMVEWARPLLSQALESKNFDALADPRLQKSYNSDEMVRMIACAANCVRHSARRRPRMSQVSEPTVEICFNISSLFFSMAEQL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1930 415 Gene3D Phosphorylase Kinase; domain 1 172 261 - -
Bisa06g1930 415 MobiDBLite consensus disorder prediction 156 189 - -
Bisa06g1930 415 MobiDBLite consensus disorder prediction 35 58 - -
Bisa06g1930 415 Pfam Protein tyrosine and serine/threonine kinase 262 394 IPR001245 GO:0004672|GO:0006468
Bisa06g1930 415 ProSiteProfiles Protein kinase domain profile. 88 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1930 415 MobiDBLite consensus disorder prediction 1 72 - -
Bisa06g1930 415 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 91 261 IPR047117 -
Bisa06g1930 415 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
Bisa06g1930 415 SUPERFAMILY Protein kinase-like (PK-like) 182 394 IPR011009 -
Bisa06g1930 415 MobiDBLite consensus disorder prediction 14 34 - -
Bisa06g1930 415 MobiDBLite consensus disorder prediction 110 189 - -
Bisa06g1930 415 Gene3D Transferase(Phosphotransferase) domain 1 262 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1930 Bisa-ChrBisa06 62059169 62062397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1930 221 393 Trihelix Transcription Factor Family AT1G68690 56.069 5.81e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa06g1930 PK_Tyr_Ser-Thr 3.6e-13 CL0016