Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1929 ATGGCTTCACCGTCTCCGGAGACATCTCAGACGGATCAGGTAGTCAGCCCCCCCTCACTTCCTCCGCAGGCAGAGACATCCGATATCACCTCTCCTCCGGCACTGACACCTGCTACTGCGTCGCCCCAACCGGCGACTGTGCTGTCGACAGCACTTGCGACTTTTGCCGCCATCGCAGAAGAAGAGCCGGAGGAGCCGGAGGAGTCGCCGGAGCCGGAGGAGTCCCCGGAGCAGCAGGTGCCACCGCCGCCGCCACAGACGCTTCCAGGGGAGTCGCTGAAGCCGTTGCCAGGACCGCCGGCGGGAAAGTCAGGGGGTACGGTAACCGGACCAGTTATAGGGGCTGTCTGTGGTTCGCTGCTTATGCTGGTTCTTGTGGGTATTTTCGCCTTTTTGTATATAAGAAGTAAACGAAGGATGAAACGATACAGATTGGACAGCTATTCTTCTGCTTCTTCACAAGCACCGAAAGCTGATGAGTTTGGTGATCCACCTCAGCACTTGCAAGGGACTATTCCTCCTCCAACTGGTGGTGGATTGACATGGCTTCCAAAGCCAACTTCACCTCATGGAGTTAGGTTGAATCAGCAATCGCCATCCAGTAATGTTCATTCTGCAACCAGCACAAGTTTGGAATCTGAGAGGCCATACCTATCTCCTGCTATGTCCTTGGGACTGTCACAAAGCAATTTTACATATGAAGAATTAGCATTTGCAACAAATAGATTCTCAGACTCAAATTTTCTTGGTCAAGGTGGTTTTGGCTATGTCCATAAAGGAGTCCTCCCAAATGGAAAAAGTGTTGCAATTAAGCAGCTGAAATCTGGGAGCCGACAAGGGGAGCGTGAGTTCCAGGCTGAAGTTGAGGTCATTAGCCGAGTCCATCACAGGCATCTTGTTTCCCTAGTAGGATACTGTATTACTGGGGACCAGAGAATGCTTGTTTATGAGTTTGTCTCAAATGATACACTAGAATTCCATTTGCATGGAAAGGACAGACCAACCATGGACTGGCCCACAAGGATGAAAATTGCTATTGGATCTGCAAAAGGATTGACATACTTGCATGAGGACTGTCAACCCAAAATCATACACCGTGACATCAAGGCATCTAACATTCTTCTTGATGATAAATTTGAGGCAAAGGTTGCTGATTTTGGACTTGCCAAATTTTCATTTGACACTGATACCCATGTCTCTACTCGAGTAATGGGAACCTTTGGATACTTGTCTCCAGAATATGCTTCTAGTGGGAAACTCACTGAGAAGTCAGATGTCTTCTCCTATGGTGTTGTGCTCTTGGAGTTGATTACAGGACGAAAGCCTGTTGATAAATTTGAGTCTTCCACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTCTCCCAAGCTTTGGAAAGTAAGAACTTTGACGCTCTCGCAGATCCAAGGTTGCAGAAGAGTTACAACTCTGACGAGATGGTTCGAATGATTGCTTGTGCTGCAAATTGCATTCGCCATTCAGCCAGGCATCGGCCTCGAATGAGCCAGGTATTTCGAGCTTTAGAAGTGTTTGTTGGGGAGAAAGGCATGCCATTTACTTTTGACCTCAATCCATTGGCCACAACATTATTTCTCCTTCGCAGAAAATCCTCATCACTATCAACACTGTAG 1656 0.4801 MASPSPETSQTDQVVSPPSLPPQAETSDITSPPALTPATASPQPATVLSTALATFAAIAEEEPEEPEESPEPEESPEQQVPPPPPQTLPGESLKPLPGPPAGKSGGTVTGPVIGAVCGSLLMLVLVGIFAFLYIRSKRRMKRYRLDSYSSASSQAPKADEFGDPPQHLQGTIPPPTGGGLTWLPKPTSPHGVRLNQQSPSSNVHSATSTSLESERPYLSPAMSLGLSQSNFTYEELAFATNRFSDSNFLGQGGFGYVHKGVLPNGKSVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCITGDQRMLVYEFVSNDTLEFHLHGKDRPTMDWPTRMKIAIGSAKGLTYLHEDCQPKIIHRDIKASNILLDDKFEAKVADFGLAKFSFDTDTHVSTRVMGTFGYLSPEYASSGKLTEKSDVFSYGVVLLELITGRKPVDKFESSTDDSMVEWARPLLSQALESKNFDALADPRLQKSYNSDEMVRMIACAANCIRHSARHRPRMSQVFRALEVFVGEKGMPFTFDLNPLATTLFLLRRKSSSLSTL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1929 551 Pfam Protein tyrosine and serine/threonine kinase 247 515 IPR001245 GO:0004672|GO:0006468
Bisa06g1929 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Bisa06g1929 551 MobiDBLite consensus disorder prediction 190 214 - -
Bisa06g1929 551 FunFam proline-rich receptor-like protein kinase PERK1 221 318 - -
Bisa06g1929 551 SMART serkin_6 243 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1929 551 Gene3D Phosphorylase Kinase; domain 1 203 318 - -
Bisa06g1929 551 MobiDBLite consensus disorder prediction 60 74 - -
Bisa06g1929 551 SUPERFAMILY Protein kinase-like (PK-like) 221 517 IPR011009 -
Bisa06g1929 551 CDD TM_EGFR-like 109 141 - -
Bisa06g1929 551 Gene3D Transferase(Phosphotransferase) domain 1 319 525 - -
Bisa06g1929 551 MobiDBLite consensus disorder prediction 148 214 - -
Bisa06g1929 551 ProSitePatterns Protein kinases ATP-binding region signature. 249 271 IPR017441 GO:0005524
Bisa06g1929 551 MobiDBLite consensus disorder prediction 1 105 - -
Bisa06g1929 551 MobiDBLite consensus disorder prediction 75 96 - -
Bisa06g1929 551 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 121 517 IPR047117 -
Bisa06g1929 551 MobiDBLite consensus disorder prediction 1 50 - -
Bisa06g1929 551 ProSiteProfiles Protein kinase domain profile. 243 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1929 551 FunFam proline-rich receptor-like protein kinase PERK8 319 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1929 Bisa-ChrBisa06 62036619 62042688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1929 99 517 Trihelix Transcription Factor Family AT1G70460 53.810 4.74e-148 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa06g1929 PK_Tyr_Ser-Thr 4.1e-47 CL0016