Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1927 ATGGCGTCACCGTCTCCGGAGATATCTCAGACAGCTCCGCCAGCCCCCGTGACAAACAATGACACCTCTTCTCCGGCACCGACAACCGCTGCGATTCCGATTAATTCCACGCCGCCATCTGCGACTGTGGCGTCTCCGCCACCTCCGGGTGCGTCGCTGGCGACGCCGTCAGAATCGCCGGACGGAATGCCGAGGGGTACTGTAATCGGATTAGTTATAGGGACTGTGTTTGGTTCGCTGCTTATGCTGGTTCTTGTGGGCATTTGCGCCTTTTTCTATAAAAGGAGTAAACGAAGAAGGATGGAACGATATGGATTGGACAACTACTCATCTGCTCCTCCACAAGGACCAAAAGCTGATCAGTTTGGTGGTCCACCTCAGCACTTGCAAGGGACTATTCCTCCTCCAACAGGTGGTGGATTGACATCGCTTCCAAAGCCAACTCCATCTCATGGAATAGCGTTGAATCAGCAATCGCCTTCCAGTAATGTTCATTCTACAACCAGCACAAGTTTGGAATCTGAGAGGCCATACTCATCTCCTGCCATGGCCTTGGGACTGTCACAAAGCACTTTTACATATGAAGAATTAGCATTTGCAACAGATAGATTCTCAGACTCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTCCATAAAGGAGTCCTCCCAAATGGAAAAAGTGTTGCAATTAAGCAGCTGAAATCGGGGAGCAGACAAGGGGAGCGTGAGTTCCAGGCTGAAGTTGAGGTCATTAGCCGAGTCCATCACAGGCATCTTGTTTCCCTAGTAGGATACTGTATTACTGGGGCCCAGAGAATGCTTGTTTATGAGTTTGTCTCAAATACTACACTAGAATTTCATTTGCATGGAAAGGACAAACCAACCATGGACTGGCCTACAAGGATGAAAATTGCTATTGGATCTGCAAAAGGATTGGCATATTTGCATGAGGACTGTCAACCCAAAATCATACACCGTGACATCAAGGCATCTAACATTCTTCTTGATGATAACTTTGAGGCAAAGGTTGCTGATTTTGGACTTGCCAAATTTTCATTTGACACTGATACCCATGTCTCTACTCGAGTAATGGGAACCTTTGGATACTTGGCTCCAGAATATGCTGCTAGTGGGAAACTCACTGAGAAGTCAGATGTCTTCTCCTTTGGTGTTGTGCTCTTGGAGTTGATTACAGGACGAAAACCTGTTGATAAATCTGAGTCTTTCACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTCTCCCAAGCTTTGGAAAGTAAGAACTTTGACTCTCTTGCAGATACAAGGTTGCAGAAGAGTTACGACTCTGATGAGATGGTTCGAATGATTGCTTGTGCTGCAAATTGCATTCGCTATTCAGCCAGGCGTCGGCCTCGAATGAGCCAGGTAGTTCGAGCTTTAGAAGGCAATATTTCTCTGGAGGATCTGAACGAGGGGAGCACACCTGGGCACAGCAGAGCATTCAGTTCCTTTGAGAGTTCAGGTTATGATACTGGCCAATATAATGAGGACCTGAAGAAGTTCAGGAAGCTTGCACTAGATCAAGGAACTAGTGATTACAGTGGGCCAAGTAGCGATTATGCTCAACATCAGTCTGCCTCAAGCAGTTCAGGCCAGCAAAATACACAAGAGACATAA 1668 0.467 MASPSPEISQTAPPAPVTNNDTSSPAPTTAAIPINSTPPSATVASPPPPGASLATPSESPDGMPRGTVIGLVIGTVFGSLLMLVLVGICAFFYKRSKRRRMERYGLDNYSSAPPQGPKADQFGGPPQHLQGTIPPPTGGGLTSLPKPTPSHGIALNQQSPSSNVHSTTSTSLESERPYSSPAMALGLSQSTFTYEELAFATDRFSDSNLLGQGGFGYVHKGVLPNGKSVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCITGAQRMLVYEFVSNTTLEFHLHGKDKPTMDWPTRMKIAIGSAKGLAYLHEDCQPKIIHRDIKASNILLDDNFEAKVADFGLAKFSFDTDTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRKPVDKSESFTDDSMVEWARPLLSQALESKNFDSLADTRLQKSYDSDEMVRMIACAANCIRYSARRRPRMSQVVRALEGNISLEDLNEGSTPGHSRAFSSFESSGYDTGQYNEDLKKFRKLALDQGTSDYSGPSSDYAQHQSASSSSGQQNTQET 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1927 555 MobiDBLite consensus disorder prediction 525 555 - -
Bisa06g1927 555 FunFam Proline-rich receptor-like protein kinase PERK1 280 488 - -
Bisa06g1927 555 ProSitePatterns Protein kinases ATP-binding region signature. 210 232 IPR017441 GO:0005524
Bisa06g1927 555 Gene3D Phosphorylase Kinase; domain 1 164 279 - -
Bisa06g1927 555 MobiDBLite consensus disorder prediction 149 178 - -
Bisa06g1927 555 FunFam proline-rich receptor-like protein kinase PERK1 182 279 - -
Bisa06g1927 555 MobiDBLite consensus disorder prediction 40 54 - -
Bisa06g1927 555 SUPERFAMILY Protein kinase-like (PK-like) 183 477 IPR011009 -
Bisa06g1927 555 MobiDBLite consensus disorder prediction 1 39 - -
Bisa06g1927 555 MobiDBLite consensus disorder prediction 1 62 - -
Bisa06g1927 555 MobiDBLite consensus disorder prediction 484 503 - -
Bisa06g1927 555 MobiDBLite consensus disorder prediction 527 555 - -
Bisa06g1927 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 324 336 IPR008271 GO:0004672|GO:0006468
Bisa06g1927 555 Gene3D Transferase(Phosphotransferase) domain 1 280 490 - -
Bisa06g1927 555 MobiDBLite consensus disorder prediction 106 178 - -
Bisa06g1927 555 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 80 531 IPR047117 -
Bisa06g1927 555 ProSiteProfiles Protein kinase domain profile. 204 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1927 555 SMART serkin_6 204 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1927 555 Pfam Protein tyrosine and serine/threonine kinase 208 477 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1927 Bisa-ChrBisa06 62003697 62008363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1927 28 548 Trihelix Transcription Factor Family AT1G70460 50.474 5.92e-164 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa06g1927 PK_Tyr_Ser-Thr 1.5e-48 CL0016