Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1915 ATGGGCGTGGACATGTCGAACAACCCACCTCCCACTTCTCACACTAAAGACTTCTTCGCCTCTCCAGCTCTCTCCCTCAGCCTCGCTGGGATATTCCGGCAGGCGGGGGCGGCGGCGGGGGCGGCGGCGTCGAGCAAGGAGGTGGAGGAGGGGGACGAGGGGAGCGGCGGTGGCGGGGGGCGGCGGGAGGACACTGTGGAGATCAGCAGCGAGAACTCCGGGCACACGAGATCCAGATCGGATGACATGGATTTTGAAGGAGAAGGAGAGCATGATGAAGACGATGGAGATGGGGACAAGAACAAGAAGAAGAAGAGAAAGAAATATCACAGGCACACTGCTGAGCAAATCAGAGAAATGGAAGCGCTTTTCAAAGAATCACCACATCCAGATGAAAAGCAAAGGCAACAACTTAGCAAGCAATTAGGGCTTGCTCCAAGACAAGTCAAGTTTTGGTTCCAAAATCGTAGAACCCAAATTAAGGCAATACAAGAACGGCATGAGAATTCATTGTTGAAGACAGAAATAGAGAAACTGAGGGAAGAAAACAAAGGGATGAGAGAGACCGTAAACAAAGCTTGCTGTCCCAACTGTGGCATGGCCACCACCACCAGAGACAACGCCATCTCCACCGAAGAACAGCAGCTTCGCATCGAAAATGCCAAGCTCAAAGCTGAGGTGGAGAAGCTACGAGCAGCGATAGGCAAGACAGCCGGGGGGGGAACGACGTCGTCGCCGTCGTGTTCGGCCGGGACCGACCAAGAGACCAGAAGCTCGCTGGACTTCTACACAGGAATTTTCGGACTGGAGAAGTCGAGGATAACGGAGCTAGTGAAGGGAGCACTGGACGAGCTCGTAAAGATGGCCACCGTAGGGGAGCCCCTGTGGGTTCGCAGCCTCGAGACTGGTCGGGAGATTCTGAACTACGACGAGTACATGAAGGAGTTCTCCGTCGAAAGCTCCTCCGGCAACGGCGGCCCAAAGCGCTGCATTGAGGCATCCAGAGAGACCGGAGTCCTCTTCATCGATCTCCCGCGACTCATCCAGAGATTCCTAGACGTGAATCAATGGAAGGAGATGTTTCCATGCTTAATCTCAAACGCAGCAACAGTAGATGTGATATGCAATGGAGAAGGTCCTAACAGAAACGGCGCCGTTCAATTGATGTTTGCAGAGGTGCAGATGCTGACGCCAATGGTGGGGACGAGAGAGGTGTATTTTGTGAGATACTGCAAGCAACTAAACGCAGAGCAGTGGGCGATAGTGGATGTTTCAGTGGATAAGGTTGAAGATAACATCGATGCGTCTCTCGTGAAGTGCAGAAAACGCCCCTCCGGTTGCATTATTGAGGATAAGTCCAATGGCCATTGCAAGGTAACATGGGTGGAGCACTTGGAATGCCAGAAGAGCACAGTGCACACATTGTATCGCACCATCGTCAACAGTGGTCTCGCATTTGGGGCGAGGCACTGGATCACCACTCTCCAACTTCAATGCGAACGTCTCGTCTTCTTCATGGCCACCAATGTTCCCATGAAGGACTCTACTGGTGTGGCCACACTGGCGGGGAGAAAAAGCATACTGAAGTTGGCACAGAGAATGACATCGAGTTTCTGCCACGCCATGGGAGCTTCGAGCTTCCACAAATGGACTAAAGTCACGAGCAAAACAGGGGAAGACGTAAGGATCAGTTCAAGGAAGAACTTGAACGATCCTGGGGAGCCTCTTGGGGTGATCTTGTGTGCAGTTTCTTCTGTGTGGCTGCCTGTTTCTCCGAATGCCCTCTTCGATTTCTTGAGGGATGAAGCTCGCAGAACTGAGTGGGATATCATGTCTAGTGGCGGGACAGTGCAATCCATAGCTAACTTGGCCAAAGGACAAGATCGAGGCAATTCAGTAACCATCCAAACAATAAAATCAAAAGAGAACAGCATGTGGGTGCTGCAAGATAGCTGCACAAATGCCTTTGAATCCATGGTGGTGTATGCACCTGTGGACATCACAGGGATTCAGTCTGTGATGACAGGCTGTGACTCTAGCAACCTAGCCATACTTCCCTCAGGATTCTCAGTCCTCCCTGATGGATTGGAAGCAAGGCCAATGGTGATCAGCTCAAGGCAGGAAGAGAGGAACACAGAAGGAGGGTCTCTGTTCACAATGGCCTTCCAGGTCCTCACCAATACTTCTCCTACTGCTAAGCTAACAATGGAGTCTGTGGAATCAGTCAACACTCTTATGTCATGTACATTAAGGAATATCAGAACCAGTTTACAGTGTGAGGATGGTTGA 2289 0.5142 MGVDMSNNPPPTSHTKDFFASPALSLSLAGIFRQAGAAAGAAASSKEVEEGDEGSGGGGGRREDTVEISSENSGHTRSRSDDMDFEGEGEHDEDDGDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIEKLREENKGMRETVNKACCPNCGMATTTRDNAISTEEQQLRIENAKLKAEVEKLRAAIGKTAGGGTTSSPSCSAGTDQETRSSLDFYTGIFGLEKSRITELVKGALDELVKMATVGEPLWVRSLETGREILNYDEYMKEFSVESSSGNGGPKRCIEASRETGVLFIDLPRLIQRFLDVNQWKEMFPCLISNAATVDVICNGEGPNRNGAVQLMFAEVQMLTPMVGTREVYFVRYCKQLNAEQWAIVDVSVDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSTVHTLYRTIVNSGLAFGARHWITTLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTSSFCHAMGASSFHKWTKVTSKTGEDVRISSRKNLNDPGEPLGVILCAVSSVWLPVSPNALFDFLRDEARRTEWDIMSSGGTVQSIANLAKGQDRGNSVTIQTIKSKENSMWVLQDSCTNAFESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSVLPDGLEARPMVISSRQEERNTEGGSLFTMAFQVLTNTSPTAKLTMESVESVNTLMSCTLRNIRTSLQCEDG 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1915 762 MobiDBLite consensus disorder prediction 35 114 - -
Bisa06g1915 762 MobiDBLite consensus disorder prediction 46 85 - -
Bisa06g1915 762 ProSiteProfiles START domain profile. 267 504 IPR002913 GO:0008289
Bisa06g1915 762 Coils Coil 162 189 - -
Bisa06g1915 762 CDD START_ArGLABRA2_like 271 500 - -
Bisa06g1915 762 SMART HOX_1 105 167 IPR001356 GO:0003677
Bisa06g1915 762 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 102 757 IPR042160 -
Bisa06g1915 762 SUPERFAMILY Bet v1-like 269 501 - -
Bisa06g1915 762 Gene3D - 308 498 IPR023393 -
Bisa06g1915 762 FunFam Homeobox-leucine zipper protein HDG1 90 179 - -
Bisa06g1915 762 CDD homeodomain 110 161 IPR001356 GO:0003677
Bisa06g1915 762 ProSiteProfiles 'Homeobox' domain profile. 103 163 IPR001356 GO:0003677
Bisa06g1915 762 SMART START_1 276 501 IPR002913 GO:0008289
Bisa06g1915 762 SUPERFAMILY Bet v1-like 531 749 - -
Bisa06g1915 762 ProSitePatterns 'Homeobox' domain signature. 138 161 IPR017970 GO:0000981|GO:0006355
Bisa06g1915 762 Gene3D - 92 175 - -
Bisa06g1915 762 Pfam Homeodomain 106 161 IPR001356 GO:0003677
Bisa06g1915 762 FunFam Homeobox-leucine zipper protein GLABRA 2 276 500 - -
Bisa06g1915 762 SUPERFAMILY Homeodomain-like 95 164 IPR009057 -
Bisa06g1915 762 Pfam START domain 281 501 IPR002913 GO:0008289
Bisa06g1915 762 Coils Coil 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1915 Bisa-ChrBisa06 61911906 61924983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1915 68 761 Homeobox Transcription Factor Family AT1G79840 65.957 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa06g1915 START 1e-54 CL0209