Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1901 ATGTCTAAACCATTAGAGCATGATTACATAGGCTTAGCATCAGAGAATCCGTCCATGGAAAGAAGCTCTGAGAAAATCTCCTCTTCTTCTTCTGCTTCTGCTGGTTCCTCTACCCTCTCCACCGAGAAGGAAAACGGCTCGTCTCTTAATTTCAAAGAGACGGAGCTCAGGCTCGGCCTTCCCGGAAGCGATTCTCCTCCTCCTGAGAGAAAATCAGGAAGTGGGGTTTCTCTTTTCGGCAAGGACTTGCAGAATAACCATAACAGCAATAATGGGTTATGTTCTTCTTCTGTGAAGAACATCATGGCTGGGGCCAAGAGGGGTTTCTCTGATGCCATTGATGGGTCTTCTGGGAAATGGGTTTTCTCTGTGAGTGACAATAATGGTGGATCTGAAGCTGATTTGGGAAGAGGGGTTTGCTTGTTCTCACCCAGAGGTGGGAATGTTGCGAAGCCTTCTCTTGTTGCTCTAGAAGCTTCTACTGCCTCTGAACAAAACATCAAGAAAGAGGTTGGAATAGTTCAGGAGAAGAAGAAGCCTCAAGTTGCTTCTGCTTCAAATGATCAGGCCACTGCTCCTCCTGCTGCTAAGGCACAAGTTGTGGGATGGCCACCAATTCGATCTTTTCGTAAGAACAGCATGGCCTCTAATTTGTCGAAGAACAATGATGGAGCTGAGGGCAAAGCAGGATATTTGTGTCTCTATGTGAAGGTGAGCATGGATGGTGCTCCTTATCTCAGAAAAGTCGATCTGAAAACTTACAGCAACTATGTGGAGCTTTCTTCGGCTCTCGAGAAGATGTTCAGCTGCTTTACCATCGGTCAATGCAGTTCTGGAGGACTTGGAGGGAAAGATGGCCTGAGTGAGAGCTGCTTGAGGGATCTTCTGCATGGTTCTGAGTATGTCCTTACTTATGAAGATAAGGATGGAGATTGGATGCTTGTTGGGGATGTTCCATGGGAGATGTTCACTGACTCATGTAGGAGACTAAGGATCATGAAAGGTTCAGAGGCAATTGGGCTAGCTCCAAGGGCCATGGAAAAATCCAGAAGCCAGAATTGA 1062 0.4661 MSKPLEHDYIGLASENPSMERSSEKISSSSSASAGSSTLSTEKENGSSLNFKETELRLGLPGSDSPPPERKSGSGVSLFGKDLQNNHNSNNGLCSSSVKNIMAGAKRGFSDAIDGSSGKWVFSVSDNNGGSEADLGRGVCLFSPRGGNVAKPSLVALEASTASEQNIKKEVGIVQEKKKPQVASASNDQATAPPAAKAQVVGWPPIRSFRKNSMASNLSKNNDGAEGKAGYLCLYVKVSMDGAPYLRKVDLKTYSNYVELSSALEKMFSCFTIGQCSSGGLGGKDGLSESCLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1901 353 MobiDBLite consensus disorder prediction 178 197 - -
Bisa06g1901 353 Gene3D - 229 346 - -
Bisa06g1901 353 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 49 340 IPR003311 GO:0005634|GO:0006355
Bisa06g1901 353 FunFam Auxin-responsive protein 228 345 - -
Bisa06g1901 353 SUPERFAMILY CAD & PB1 domains 234 334 - -
Bisa06g1901 353 Pfam AUX/IAA family 53 344 IPR033389 -
Bisa06g1901 353 ProSiteProfiles PB1 domain profile. 233 335 IPR000270 GO:0005515
Bisa06g1901 353 MobiDBLite consensus disorder prediction 1 83 - -
Bisa06g1901 353 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1901 Bisa-ChrBisa06 61705727 61710204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1901 236 338 B3 DNA Binding Superfamily AT2G46530 33.010 6.34e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa06g1901 AUX_IAA 5.4e-91 CL0072