Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1897 ATGACAATCAAGTTCATGAACTTATTTAATAAGCCACAATACTACACAAGTTCTGCTATATGTATATATCCCACCAGAAAAGCCTTTTGTGCCATATTCCCCAACTTCTTATCCTCTCCATCTCCATCTCCGTCTTCAAGGCTTCAGCTTCTGAATATGGCAGGCATAGCATTGGGACGCTTCGATGATTCTTTCAGTCTGGGCTCCATTAAAGCCTACCTTGCTGAGTTCATCTCAACCCTCCTCTTTGTGTTTGCTGGTGTTGGCTCAGCCATAGCCTATGGGAAGTTGACATCAGGGGCAGCTCTTGATCCTGCAGGGTTAGTGGCAGTGGCAATATGCCATGGATTTGCTCTGTTTGTTGCAGTGTCAATTGGGGCTAACATATCTGGAGGGCATGTGAACCCAGCAGTGACCTTTGGATTGGCTCTTGGAGGACAGATCACAATCATCACTGGTATCTTCTACTGGATTGCTCAGCTTCTTGGCTCCATTGTAGCTTGCTTCCTCCTCAAGTTTGTCACTGGAGGATTGGCAACTCCCATCCACAGTTTAGCTGCTGGAGTTGGAGCATTTGAAGGAGTGGTTATGGAGATCATCATCACATTTGCATTGGTCTACACTGTGTATGCCACAGCTGCTGACCCCAAGAAGGGCTCTCTAGGCACCATTGCACCCATTGCCATTGGCTTCATTGTTGGTGCCAACATCTTGGCGGCCGGCCCCTTCTCCGGTGGCTCCATGAACCCGGCCCGGTCCTTTGGGCCGGCTGTTGCCACCGGTGACTTCCATGACAACTGGATCTACTGGGTTGGACCACTCATTGGTGGTGGCCTGGCTGGCCTCATCTATTCCAATGTATTCATGCCCTCTGACCATGCCCCTTTGGTTAATGAGTATTGA 903 0.4928 MTIKFMNLFNKPQYYTSSAICIYPTRKAFCAIFPNFLSSPSPSPSSRLQLLNMAGIALGRFDDSFSLGSIKAYLAEFISTLLFVFAGVGSAIAYGKLTSGAALDPAGLVAVAICHGFALFVAVSIGANISGGHVNPAVTFGLALGGQITIITGIFYWIAQLLGSIVACFLLKFVTGGLATPIHSLAAGVGAFEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVATGDFHDNWIYWVGPLIGGGLAGLIYSNVFMPSDHAPLVNEY 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1897 300 FunFam Probable aquaporin TIP1-1 54 300 - -
Bisa06g1897 300 NCBIfam MIP family channel protein 75 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 Gene3D Glycerol uptake facilitator protein. 53 298 IPR023271 -
Bisa06g1897 300 Pfam Major intrinsic protein 67 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 SUPERFAMILY Aquaporin-like 65 295 IPR023271 -
Bisa06g1897 300 CDD MIP 71 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 PRINTS Major intrinsic protein family signature 197 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 PRINTS Major intrinsic protein family signature 71 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 PRINTS Major intrinsic protein family signature 267 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 PRINTS Major intrinsic protein family signature 230 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bisa06g1897 300 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Bisa06g1897 300 PANTHER AQUAPORIN-8 56 291 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1897 Bisa-ChrBisa06 61683171 61685170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1897 53 298 Major Intrinsic Protein MIP AT3G16240 84.211 5.88e-146 408