Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1885 ATGTCAGAACCAGAACAAAGCTGCTCGGAATCTTCCACCACCACCACCAGCAATCCCTCCTCTTCATCTTCGTCTTCTTCTTCTTCTTCTTCCGAAACCCAGAACCCTCAGTCACAGAGCACAGAACAGAGCCGACGGAAGAGACCCAGAGACGGAGACCCCTCGAGCCACCACCCCTCCTACCACGGCGTCCGAATGCGAAATTGGGGCAAATGGGTCTCCGAAATCCGAGAGCCCCGCAAGAAATCGAGAATCTGGCTCGGCACCTTCGCCACTCCGGAAATGGCCGCTCGAGCTCACGACGTCGCAGCCCTCAGCATCAAAGGCCAATCTGCCATTCTTAACTTCCCTCAGATAGCTTCCCTGCTTCCCAAACCCCTCACCCTCGCCCCTCGCGATATCCAGGTCGCTGCCTCCGCCGCCGCCGCCATGGTCCAATTCGACCCCGTACAGCCCCCCTCGTCGCCGGAAGTATCAGAGTCCTCTGAGCTCAGTGAGATTGTGGAATTGCCCAATGTTGACGAGGGCTTCCATTCAGGTACTGATGAGTTTGTGTGGATGGAGGCGATGGATTGTTGGCTAAACCAGAAAAAATGTGAGTGCCTACCAACAAAAGGCCCTTGGATCCCATGCTTGGCCAACACCGTGTTGGCCAAGTAG 660 0.5621 MSEPEQSCSESSTTTTSNPSSSSSSSSSSSSETQNPQSQSTEQSRRKRPRDGDPSSHHPSYHGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGQSAILNFPQIASLLPKPLTLAPRDIQVAASAAAAMVQFDPVQPPSSPEVSESSELSEIVELPNVDEGFHSGTDEFVWMEAMDCWLNQKKCECLPTKGPWIPCLANTVLAK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1885 219 MobiDBLite consensus disorder prediction 1 42 - -
Bisa06g1885 219 MobiDBLite consensus disorder prediction 1 63 - -
Bisa06g1885 219 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Bisa06g1885 219 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Bisa06g1885 219 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Bisa06g1885 219 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Bisa06g1885 219 SUPERFAMILY DNA-binding domain 60 117 IPR016177 GO:0003677
Bisa06g1885 219 CDD AP2 59 117 IPR001471 GO:0003700|GO:0006355
Bisa06g1885 219 Gene3D AP2/ERF domain 60 119 IPR036955 GO:0003700|GO:0006355
Bisa06g1885 219 FunFam Ethylene-responsive transcription factor 2 60 118 - -
Bisa06g1885 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 29 174 - -
Bisa06g1885 219 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Bisa06g1885 219 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1885 Bisa-ChrBisa06 61480813 61482035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1885 1 194 AP2-EREBP Transcription Factor Family AT5G11590 46.818 1.87e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa06g1885 AP2 2.6e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1885 06 61480813 61482035 Bisa06g1885 06 61480813 61482035 ECH