Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1873 ATGGAAGTGCCGGAGTACTTTGTCGATGGCTATTTCGGAGTCGGAGGGGACCACTTCTCGTCGGAGAAGCGCTACGGCGACCAGAAGCCCGGGGATCCGTTCGCCATTGACGACCTGCTTGACTTCTCCAACGCTGACGCCATCATGTCCGATGGCTTCTTCGATAATGTCGCCGGGAACTCCACAGACTCCTCCACTGGCACCGCCGTCGACAGCTGCAACTCCTCAATTTCCGGCGCCGACAACCGTCTATCCGCCAACTTTGGCTCTCGCAACTTCGGCGATCCTCAATTCTCCGGTGAACTCTGCGTGCCGTATGACGATATGGCGGAACTGGAATGGCTGTCGAACTTCGTGGAAGACTCGTTTGCAGCACAAGACGAGCTTAAAACACTTCACCTTCTCTCCGGCGCCACCACCGCTTCCGCATTTGGCGCGAAACCACAGACTCCAGAATCTTCCTCCTCCTCCGAAACTCTCACTCATTTCCCTACCGATGCCACTCGAAACGCACCGTTTTTCCGTCCGGAAACTCCGCTCCCTGGAAAAGCACGGAGCAAGCGTTCACGCGCTGCTCCCGGTGACTGGTCCACGCGCCTCCTGCACCTGGTAACGCCAGTGGCACACTCAGCCACGGCGGCTGAAGCGAAACAGACGCAAGCCAAGGCGGCGCCGGGGAAGAAGAGAGAGGGTTCAAATTCGGACTCCTCTGGGCGGAAATGCCTACACTGCGGCGCCGAGAAGACACCGCAATGGCGGACAGGTCCGATGGGTCCGAAGACGCTGTGCAATGCTTGTGGAGTCCGGTACAAGTCCGGGAGGCTAGTGCCTGAGTACCGCCCTGCTGCGAGCCCGACGTTTATGTCGACGAGGCATTCTAATTCTCATCGGAAGGTATTGGAGCTGAGGAGGCAGAAGGAGCTGCAAAGGCAGCAGCAGCAACATCAGCATCTGATTAGTCAAACTTCAATTTTCGGCGTATCCAACGGTGGAGATGAGTTCTTGATCCATCACCATGGTGGGCCAGACTATAGGCATATTATCTAG 1047 0.5702 MEVPEYFVDGYFGVGGDHFSSEKRYGDQKPGDPFAIDDLLDFSNADAIMSDGFFDNVAGNSTDSSTGTAVDSCNSSISGADNRLSANFGSRNFGDPQFSGELCVPYDDMAELEWLSNFVEDSFAAQDELKTLHLLSGATTASAFGAKPQTPESSSSSETLTHFPTDATRNAPFFRPETPLPGKARSKRSRAAPGDWSTRLLHLVTPVAHSATAAEAKQTQAKAAPGKKREGSNSDSSGRKCLHCGAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMSTRHSNSHRKVLELRRQKELQRQQQQHQHLISQTSIFGVSNGGDEFLIHHHGGPDYRHII 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1873 348 MobiDBLite consensus disorder prediction 143 197 - -
Bisa06g1873 348 FunFam GATA transcription factor 231 317 - -
Bisa06g1873 348 MobiDBLite consensus disorder prediction 222 236 - -
Bisa06g1873 348 Pfam GATA zinc finger 241 274 IPR000679 GO:0006355|GO:0043565
Bisa06g1873 348 CDD ZnF_GATA 240 287 IPR000679 GO:0006355|GO:0043565
Bisa06g1873 348 Gene3D - 235 285 IPR013088 GO:0006355|GO:0008270
Bisa06g1873 348 PIRSF Txn_fac_GATA_plant 20 330 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bisa06g1873 348 MobiDBLite consensus disorder prediction 143 166 - -
Bisa06g1873 348 ProSitePatterns GATA-type zinc finger domain. 241 266 IPR000679 GO:0006355|GO:0043565
Bisa06g1873 348 ProSiteProfiles GATA-type zinc finger domain profile. 235 271 IPR000679 GO:0006355|GO:0043565
Bisa06g1873 348 SMART GATA_3 235 285 IPR000679 GO:0006355|GO:0043565
Bisa06g1873 348 PANTHER GATA TRANSCRIPTION FACTOR 27 315 - -
Bisa06g1873 348 MobiDBLite consensus disorder prediction 209 241 - -
Bisa06g1873 348 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 236 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1873 Bisa-ChrBisa06 61099358 61100593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1873 32 348 C2C2-Gata Transcription Factor Family AT4G32890 46.970 7.34e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa06g1873 GATA 4.9e-15 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1873 06 61099358 61100593 Bisa06g1873 06 61099358 61100593 ECH