Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1859 ATGCCGGTACTGCGTAGTGGAGTGCGCAGGGGCCGGGCAGCAGCGAAGAAACAGCAGCAGCAACCTAATCCGTTGGTGCAAGAAGAGGAAGCAATTGCAACGAGGACAAGGAGGAGGCGGGCAGCGGCGGCAGCGGCGGCAGCAGTGCCGAAGACTAACAAACAACAGAAGCAGGTGGTGGTCGATGAGAACGTAGCTGTACCGGCGAAGGAGGAAGAGAACAAGGGATTGGTCGAAGCTGTTCGTGTTGGTGAAGCTGCTGGTGGTGGAGCGGAGAGGGAAGAGGTAGGGGAGAAGCAGATGGATGATTACGATAGTGGAGCTCGGAGCAATGATAAGGGCAATGCCGGTGAAGATGAGGGGAGCACCGCTCCACTTCCTGAGAAGGTTCAAGTAGGCGGGTCCCCTACGTATAAAATAGATAGAAAACTGGGAAAGGGTGGATTTGGGCAAGTTTATGTTGGTCGACGTATTTCTGGTGTAAATATGAATGAGAGGACAGGGCCTGGAGCTGTGGAGGTCGCATTAAAATTTGAGCATAGAAGTAGCAAAGGATGTAACTATGGACCACCATACGAGTGGCAAGTGTACAACACTCTTGGTGGCAGTCATGGTGTGCCGCGTGTACACTACAAGGGCAGGCAAGGTGACTATTATGTTATGGTTATGGATATGTTGGGACCTAGCTTGTGGGATGTTTGGAATAATAACTCTCACACAATGTCAACCGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCCATATTGGAAAAGATGCACTCGCGAGGGTATGTACATGGTGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCCGGGACACCTGATGAAAAAAAATTGTTCCTTGTTGACCTTGGATTAGCTACTAGATGGAGGGATAATACAACAGGCTTGCATGTGGAATATGACCAACGGCCAGATGTTTTCAGGGGCACAGTTCGCTATGCTAGTGTACATGCACACTTAGGGAGAACTGGAAGTAGGAGGGATGATCTGGAATCTCTTGCGTATACTCTAATTTTCCTTCTTCGTGGTCGTCTCCCTTGGCAGGGGTACCAGGGAGAAAACAAAGGGTTTCTTGTTTGCAAGAAGAAGATGGGAACATCTCCAGAAAGCCTATGTTGCTTCTGCCCCCTGCCGTTCAGACACTTTGTCGAACATGTTGTGAACTTGAAGTTTGATGAAGACCCTAACTACGCAAAATATATATCTCTATTTGATGGCATTGTCGGTCCAAATCCAGATATTAGGCCAATTAATACAGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGGTCGGTTGGCCATGGAAGAAGAAGATGATGAACAGCCAAAAAAGAAGATCCGTATGGGTACGCCAGCTACACAGTGGATAAGTGTTTACAATGCTCGCAGACCAATGAAACAAAGATATCATTACAATGTAGCAGATTCGAGGCTGTCCCAGCACATTGAGAAAGGAAATGAGGATGGCTTATATATTAGCAGTGTGGCTTCATGTCAGAACCTGTGGGCCTTAATAATGGATGCAGGCACTGGTTTCACCGCCCAAGTTTATGAGCTCTCCCCCTATTTTCTTCACAAGGAATGGATAATGGAGCAGTGGGAGAAAAATTATTATATCAGTGCAATTGCTGGAGTGACAAATGGGAGTTCGTTAGTAGTGATGTCCAAGGGCACACAGTTTGTGCAGCAATCCTACAAAGTTAGTGATTCATTTCCATTTAAGTGGATTAACAAAAAATGGAGGGAAGGCTTTTATGTTACGGCAATGGCCACCGCAGGGAGTAGATGGGCAGTAGTTATGTCTCGTGGTGCGGGATTTTCTGACCAGGTTGTGGAATTGGACTTTCTTTATCCTAGTGAAGGGATTCACAAGCGGTGGGATTATGGATATCGTATCACGGCAACTGCTGCAACCTGGGATCAAGCCGCATTCGTCCTCAGTGTGCCTCGGAGGAAACCTGTGGATGAAACACAGGAAACACTCAGAACTTCATCTTTTCCCAGTGTACATGTCAAGGAAAAGTGGGCAAAGAACCTCTATATTGCATCTATTTGCTATGGACGAACGGTTTCTTGA 2109 0.4685 MPVLRSGVRRGRAAAKKQQQQPNPLVQEEEAIATRTRRRRAAAAAAAAVPKTNKQQKQVVVDENVAVPAKEEENKGLVEAVRVGEAAGGGAEREEVGEKQMDDYDSGARSNDKGNAGEDEGSTAPLPEKVQVGGSPTYKIDRKLGKGGFGQVYVGRRISGVNMNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDNTTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPESLCCFCPLPFRHFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKIRMGTPATQWISVYNARRPMKQRYHYNVADSRLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFTAQVYELSPYFLHKEWIMEQWEKNYYISAIAGVTNGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAVVMSRGAGFSDQVVELDFLYPSEGIHKRWDYGYRITATAATWDQAAFVLSVPRRKPVDETQETLRTSSFPSVHVKEKWAKNLYIASICYGRTVS 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1859 702 FunFam casein kinase 1-like protein HD16 111 458 - -
Bisa06g1859 702 SUPERFAMILY Protein kinase-like (PK-like) 137 418 IPR011009 -
Bisa06g1859 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Bisa06g1859 702 Gene3D Transferase(Phosphotransferase) domain 1 103 464 - -
Bisa06g1859 702 MobiDBLite consensus disorder prediction 88 116 - -
Bisa06g1859 702 ProSiteProfiles Protein kinase domain profile. 138 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1859 702 MobiDBLite consensus disorder prediction 86 137 - -
Bisa06g1859 702 MobiDBLite consensus disorder prediction 1 58 - -
Bisa06g1859 702 CDD STKc_CK1 138 414 - -
Bisa06g1859 702 SMART serkin_6 138 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1859 702 Pfam Protein kinase domain 138 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1859 702 PANTHER CASEIN KINASE-RELATED 132 664 - -
Bisa06g1859 702 ProSitePatterns Protein kinases ATP-binding region signature. 144 177 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1859 Bisa-ChrBisa06 60861763 60866634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1859 99 363 AGC Kinase Gene Family AT3G08730 23.596 4.76e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Bisa06g1859 Pkinase 1e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1859 06 60861763 60866634 Bisa06g1859 06 60861763 60866634 ECH