Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1843 ATGTCCATCTCCCTCCAAAAGATCTCCATTCTCCTTGAGGTCCAGTCTGTGGTTAGTATATTTAGTGTGTACGTGTTGTTCAATATTTTGTCATCTTTCATCAGAACGCTGAAGGAAAGGAACAGCATAAGCTTGTCAAAATTGGAGCTGCAGCCTGCAAGTCTGTTTCAAGATTCTCCGGAAGTTATATGGTTAAACACTGAATATTCTCGCTTAATGATTCTATTCAGAGAAATGAACCTTGTACGGATCCCTCATTTGAAGGTTCTTCACCTTCTATTCTTCCTTCTGCTTCTTCTTCACCTTCATTCTCTCTGGTGCTACCCGACGCCCATGAGCTGTACGGACACGACTCGCGTCTGCACTTCTTTCTTGGCCTTCAAGCCCCAACCGAACCAGACGCTTGCTGTAATGCAGAGCATGTTCGATGTACTGCCAAATGACATTACTGTCGAAGGCAATGGTTGGGATTACATATTCATCAGGAAGAACTGTTCCTGTGCTTATGGTCTAAAGAAATACGTATCGAACACTACGTTCACTGTGAAATCCAATGAGGGGCTTCTGTATGACTTGCTGATGAATGCCTACGATGGGCTTGCTCTCTTGCCCAACACGACCCGGAGGGCCAAAAACGGCGCCGTTATATCACTGAGGTTGTTTTGTGGGTGTTCTAGTGGACTGTGGAACTATTTGGTGAGTTATGTGATGAGAGATGGGGATAGTGTTGAATCTTTGGCAAGTCGGTTCGGGGTGAGTATGGATAGTATTGAGAAGGTGAATGGTATTGATAATCCAGATAATGTCACTGTGGGTTCTTTGTATTATGTACCTCTGGATTCAGCTCCTGGTGAGCCGTATCCCTTGAAGGATGATACTCCTCCTGCACCTGCACCTGCTCCATCTGCTGACAATTTTTCAGCTAATCAAGTCGATAATAAGGCTCATGTACCGTACACTTGGATCATTGGTGGTTTAGGGGTTGGTCTTGCTCTCATTGTATTAAGCATAATTCTCTGTGTTTCCCTGAGATCATCACATTGTTTTGCCGACACCAGAAGTAGTCATGCAAAAGATACTGAAGGCAAGATCTTTCATAAGTTCCATATTCTTCGGAATTCAAGTTTTTGTTGTGGTTCAGGAAGGTACATAAGTGACAAGCCTGTAGACCAGAAGCAAACTGATGGTGAATCTAGCAACCACCAAATTACCATTCCCAAAGTTCCAACTCTAGGGACTGATGTATTTGACATGGATAAGCCTGTAGTTTTCACATATGAAGGGATTTTCTCCTCAACTGATTGCTTCTCTGATTCAAACCTACTTGGGCATGGAACATATGGTTCTGTTTACTATGGCGTCCTTCGTGACCAGGAAGTTGCTATTAAAAGAATGACTGCTACAAAAACTAAAGAGTTTATGTCAGAGATGAAAGTCCTCTGCAAGGTTCATCATGCAAATTTGGTAGAATTGATCGGCTATGCAGCTAGTCATGATGAGCTTTTCCTTATTTATGAATATGCACAAAAGGGATCACTCAAAAGCCATTTGCATGAACCGCAGAATAAGGGTCATTCCTCACTTTCTTGGATTATGAGGGTCCAGATTGCACTTGATGCTGCTAGGGGCCTTGAGTACATACATGAGCACACCAAAACACATTACATCCATCGAGATATTAAGACAAGTAACATCTTACTTGATGGTTCCTTCAGAGCAAAGATTTCGGACTTTGGATTGGCAAAACTTGTTGGGACAACAAACGAGGGAGAAATAACTACAACCAAAGTTATTGGTACATATGGTTATCTTGCTCCAGAATACTTAAGTGATGGTCTTGCAACAACCAAAAGTGATGTCTATGCGTTTGGTGTTGTTCTCTTTGAGATCATATCTGGGAAGGAAGCCATCATTCGAACAGAAGGCACAACGACAAAAAATCCTGAAAGACGTTCATTGGCATCTATTATGTTGGCGGCTCTAAGAAACTTGCCCGATTCCTTGAGCATGTCAAGCATGAGAGATTATATTGATCCTAATATGATGGATTTGTATCCTCATGATTGTGTATACAAGATGGCGATGCTGGCAAAGCAATGTGTGGATGACGATCCCATTCTACGACCTGATATGAAACAAGTTGTGATTTCTCTCTCACAAATTCTCTTGTCTTCCATCGAGTGGGAAGCAACTCTCGCGGGGAACAGTCAGGTTTTCAGTGGGCTTGTTCAGGGAAGATAG 2241 0.4257 MSISLQKISILLEVQSVVSIFSVYVLFNILSSFIRTLKERNSISLSKLELQPASLFQDSPEVIWLNTEYSRLMILFREMNLVRIPHLKVLHLLFFLLLLLHLHSLWCYPTPMSCTDTTRVCTSFLAFKPQPNQTLAVMQSMFDVLPNDITVEGNGWDYIFIRKNCSCAYGLKKYVSNTTFTVKSNEGLLYDLLMNAYDGLALLPNTTRRAKNGAVISLRLFCGCSSGLWNYLVSYVMRDGDSVESLASRFGVSMDSIEKVNGIDNPDNVTVGSLYYVPLDSAPGEPYPLKDDTPPAPAPAPSADNFSANQVDNKAHVPYTWIIGGLGVGLALIVLSIILCVSLRSSHCFADTRSSHAKDTEGKIFHKFHILRNSSFCCGSGRYISDKPVDQKQTDGESSNHQITIPKVPTLGTDVFDMDKPVVFTYEGIFSSTDCFSDSNLLGHGTYGSVYYGVLRDQEVAIKRMTATKTKEFMSEMKVLCKVHHANLVELIGYAASHDELFLIYEYAQKGSLKSHLHEPQNKGHSSLSWIMRVQIALDAARGLEYIHEHTKTHYIHRDIKTSNILLDGSFRAKISDFGLAKLVGTTNEGEITTTKVIGTYGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGKEAIIRTEGTTTKNPERRSLASIMLAALRNLPDSLSMSSMRDYIDPNMMDLYPHDCVYKMAMLAKQCVDDDPILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1843 746 Pfam Protein tyrosine and serine/threonine kinase 440 716 IPR001245 GO:0004672|GO:0006468
Bisa06g1843 746 FunFam PTI1-like tyrosine-protein kinase 3 508 732 - -
Bisa06g1843 746 FunFam Kinase family protein 411 507 - -
Bisa06g1843 746 Gene3D LysM domain 230 285 IPR036779 -
Bisa06g1843 746 ProSiteProfiles LysM domain profile. 233 277 IPR018392 -
Bisa06g1843 746 SMART LysM_2 234 278 IPR018392 -
Bisa06g1843 746 Gene3D Transferase(Phosphotransferase) domain 1 509 732 - -
Bisa06g1843 746 ProSitePatterns Protein kinases ATP-binding region signature. 442 463 IPR017441 GO:0005524
Bisa06g1843 746 ProSiteProfiles Protein kinase domain profile. 436 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1843 746 SUPERFAMILY Protein kinase-like (PK-like) 415 718 IPR011009 -
Bisa06g1843 746 SUPERFAMILY LysM domain 233 278 IPR036779 -
Bisa06g1843 746 SMART serkin_6 436 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1843 746 Pfam LysM domain 235 272 IPR018392 -
Bisa06g1843 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Bisa06g1843 746 MobiDBLite consensus disorder prediction 286 307 - -
Bisa06g1843 746 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 107 740 IPR044812 GO:0019199|GO:0045087
Bisa06g1843 746 Gene3D Phosphorylase Kinase; domain 1 410 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1843 Bisa-ChrBisa06 60518857 60531231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1843 111 746 Receptor kinase-like Gene Family AT1G51940 68.789 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa06g1843 PK_Tyr_Ser-Thr 8.1e-51 CL0016