Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1841 ATGAAGGGCAGACACGAAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGCCACTGTGAGGAGAGGAAGCTTGAGCTTAGACTTGGTCCTCCTGGTGGCGAAGACTGGTCTCTGAATCATCACCATAACACCAAAAACGTCACCAACGCTGACGACTCTCTCCTCTCTCTTGCTTGCTTCTCTCAACCCCAGAAAATTTCTTCCTCTCCATGGCCTTCTCAGGCTTCATCATTTCTTCAGTACTCATCTTCAAGCCCAGTGGTCGACTTGCAGAATGCAGAGAAGAAAGCTTTCTCAGTGTCACCCTCTTCTGCAAATCCACCTGTCTCCTCCAACACCTCTCAGAAAAGAACTGCTCCGGGTCCGGTAGTGGGATGGCCACCAATTCGATCATTTCGGAAGAACCTTGCAAGCAGCAGCTCTTCTAAGACAGCTCATCATGAGACCCAGCATCAGAATGAGCATGTTGTTGTTGCAGACAAGGTTGCTGGTAAGAAACCTCTGACTGACAACGTTGGTAAAGGTTTGTTTGTGAAGATCAACATGGATGGTGTTCCTATTGGGAGAAAAGTGGACCTCAATGCTTATGACAGCTATGAAAAACTCTCCTCTGCTGTTGATGAACTCTTCAAATGCCTCCTTGCTGCACAAAGAGATTCTTGTGGTGGAGGAATTCAAAAGAAGGAAGAGGAAGAGGAAGAGAAAGGAATTAAGGCCAAGGGTTTAATGGATGGAAGTGGGGAATATACTCTTGTTTATGAAGATAATGAAGGAGACAAGATGCTTGTTGGGGATGTGCCATGGCACATGTTCGTCTCAACAGTGAAGAGGCTGCGTGTGTTGAAGAGTTCTGAGCTTTCTGCTTTTACTCGTGGTAGCAAGCAAGAGAAGAAAACCACTTGA 900 0.4678 MKGRHEGGGGGGGRRSHCEERKLELRLGPPGGEDWSLNHHHNTKNVTNADDSLLSLACFSQPQKISSSPWPSQASSFLQYSSSSPVVDLQNAEKKAFSVSPSSANPPVSSNTSQKRTAPGPVVGWPPIRSFRKNLASSSSSKTAHHETQHQNEHVVVADKVAGKKPLTDNVGKGLFVKINMDGVPIGRKVDLNAYDSYEKLSSAVDELFKCLLAAQRDSCGGGIQKKEEEEEEKGIKAKGLMDGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVLKSSELSAFTRGSKQEKKTT 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1841 299 MobiDBLite consensus disorder prediction 134 153 - -
Bisa06g1841 299 MobiDBLite consensus disorder prediction 97 118 - -
Bisa06g1841 299 MobiDBLite consensus disorder prediction 25 46 - -
Bisa06g1841 299 MobiDBLite consensus disorder prediction 97 128 - -
Bisa06g1841 299 SUPERFAMILY CAD & PB1 domains 167 279 - -
Bisa06g1841 299 FunFam Auxin-responsive protein 169 294 - -
Bisa06g1841 299 Gene3D - 169 293 - -
Bisa06g1841 299 ProSiteProfiles PB1 domain profile. 174 282 IPR000270 GO:0005515
Bisa06g1841 299 Pfam AUX/IAA family 23 287 IPR033389 -
Bisa06g1841 299 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 20 285 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1841 Bisa-ChrBisa06 60475820 60480832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1841 178 293 B3 DNA Binding Superfamily AT4G23980 31.897 7.50e-14 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa06g1841 AUX_IAA 2.2e-71 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1841 06 60475820 60480832 Bisa06g1841 06 60475820 60480832 ECH