Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1765 ATGGATATGAGAATGCAAGACCCGATGGCGTTTCAATCGATCAAACCCCACTTTCCCGAACAAGAACAGCTTAAATGCCCGCGTTGCGACTCCACGAACACCAAATTCTGCTACTACAACAACTACAACCTCTCGCAGCCTCGCCATTTCTGCAAGAATTGCAGACGCTATTGGACCAAAGGCGGTGCTCTACGAAACATCCCAGTCGGCGGTGGGAGTCGAAAGAACACAAAGCGATCGTCCAACTCCAAACGCCCTTCTGCTCCTCCATCAACATCATCATCATCTCCGTCGATTTCGTCTGCCTCTGGAGCACAGACCCAAGATCCGGATCCTGACACGACCCGGTTTTATCCCAACCCGAATGATCAGGTTAACATTAATGGGAGCTTCAGCTCCCTTCTCGCGTCAACTGGGCATTGGGGAAGCTTACTGGATGGTCTGAATTCAAATGGGTCTAGCTTTAAATTGATGCAAATGCATGAATTTGGAGGGAATCTGGGTTCTGTCCCTGTGAAGAACTCGGATTCGGGTCGAAACCCGGGAATGGAGAAGCAGAGCAATTCAGAAAGCTTTCTGGGTCTGCAAAACAATAGCGGTTCAAGTTCAAGCTGTTGGAATGGTGGTAGCCATGGATGGCCTGATCTTGCAATATACACAACACCAGGCTCAAGCTTGTAG 681 0.4934 MDMRMQDPMAFQSIKPHFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSNSKRPSAPPSTSSSSPSISSASGAQTQDPDPDTTRFYPNPNDQVNINGSFSSLLASTGHWGSLLDGLNSNGSSFKLMQMHEFGGNLGSVPVKNSDSGRNPGMEKQSNSESFLGLQNNSGSSSSCWNGGSHGWPDLAIYTTPGSSL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1765 226 MobiDBLite consensus disorder prediction 65 123 - -
Bisa06g1765 226 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Bisa06g1765 226 MobiDBLite consensus disorder prediction 73 123 - -
Bisa06g1765 226 MobiDBLite consensus disorder prediction 174 196 - -
Bisa06g1765 226 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 183 IPR045174 GO:0003700|GO:0006355
Bisa06g1765 226 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Bisa06g1765 226 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1765 Bisa-ChrBisa06 59179245 59179925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1765 15 145 C2C2-Dof Transcription Factor Family AT1G51700 57.664 4.91e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa06g1765 zf-Dof 2.6e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g1677 10 45779562 45780161 Bisa06g1765 06 59179245 59179925 CCT
Bisa06g1765 06 59179245 59179925 Bisa06g1765 06 59179245 59179925 ECH