Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1749 ATGCTCTATGCCGTCGGCGATGCAACTTTTTCAAATCCTTCAGTTGAAGCTCTGCCACCTAGGGTTTATGTGGGTCACTTGGTTTACAAAGGGAAGGCCACGCTTACGGTGATTCCGAGGCCTCCAGAATTTGTGACATTGGATTCAGGGGCATTCAAAGTATCTCGGGAAGGTTATGAGTTGCTTCGGTCTGCTCCTGCAGTTGATAACGGGGCAGTTTGA 222 0.491 MLYAVGDATFSNPSVEALPPRVYVGHLVYKGKATLTVIPRPPEFVTLDSGAFKVSREGYELLRSAPAVDNGAV 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1749 73 SUPERFAMILY ssDNA-binding transcriptional regulator domain 20 69 IPR009044 GO:0003677|GO:0006355
Bisa06g1749 73 Pfam Whirly transcription factor 28 69 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bisa06g1749 73 Gene3D Transcriptional Coactivator Pc4; Chain A 14 73 IPR009044 GO:0003677|GO:0006355
Bisa06g1749 73 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 11 69 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1749 Bisa-ChrBisa06 58339119 58340313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1749 6 67 Whirly Transcription Factor Family AT1G14410 61.290 2.74e-20 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Bisa06g1749 Whirly 5.8e-09 CL0609