Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1748 ATGTGTTGTGCTCTTATTAGCATAATATATTTCAGCAAGGGTTTGTGGGATCTCGTAGCCAAAACTGGTGACTTCAATAGGCTGAACTGGTTGGTTACTATAATCAGAGGACTAGTTTGGATTTCTTTGACAGTTTCTTTGCTTGTTCAGGGATCTAAATGGATCCAAATTTTAAACTCTATTTGGTGGGTTTCTTCATGTACACTGATTTCAGCTCTCAATATAGAAAATCTGTTCAAAGAGAAAACACTTCAAATCTTTTACACTGTACAATGGCCCATACATCTTTTACTTGCCTTATGTGCCTTCCAAAACTTGTGTTATTTTGTCTCCCCACGTGTCACAGAAACTGATATATCTGAGCCTCTATTATTTCAAAACATTGAAAGTAATGAAACAGGACTAGGCCATGCAACATTCCTTAGCAAATTGACTTTCTCTTGGATTAATCCTTTACTCAGTATTGGTTACTTAAAGCCTCTAGCTCTTGAAGACATCCCTCGTATTATTTCTGAAGATGAATCTGATTCAGTTTACCAAAAGTTTGCTCATGCATGGGACATGCTTTTGCAGGAGAGGAACAAGAACAATACCAAAAACTTGGTTCTTTGGTCCATAGCCAAAAATTACTTAAAAGAGAACTTATTAATAGCTCTTTTTGCATTTCTCAGGACAATCTCTCTTGTAGTCTCTCCTCTAATACTCTATGCTTTCGTGAACTACGCGAATCACGATGAGCCAAGCATGAAAGAAGGTCTTTGCATAGTAGGGTATCTGATCATCACCAAGCTGATTGAATCTTTGTCCCAGAGACATTGGTTTTTTAATGCCAGAAGGTCAAGAATGAGAATGAGATCAGCTCTAATGGTGGCAATCTACAAAAAGCAGCTAAAGCTTTCAAGTTTGGCTCGAAAGAATGCATTCCACAGGGGAGATTGTCTTGGTGCAATTCCTGGTTTAGTCCCTCTTCTTGTTTGTGGCCTTTTGAATGTACCATTTGCAAAAGTGCTTCAAAAGTGTCAGTCTGAATTCATGATTGCACAGGATGAGCGCTTGAGATCAACTTCTGAAATTCTGAATACTATGAAGATCATAAAGTTACAGTTGTGGGAGGATAAATTCAAGAACTTGGTCGAATTGCTTCGAAGTAAAGAGGTCAAGTGTTTGGCTAAGGCACAATTCATGAAAGCACATGGGACTCTTATGTATTGGATGTCTCCTACAGTCATTTCATCAATCATTTTCCTCGTATGTGCAATCTTTCAATGTGCCCCATTAAATGCTGAGACCATTTTCACTGTTCTTGCAACCTTGAGGATCATGTCAGAACCTGTTAGAATGATCCCAGAGGCTCTTTCTGTTATGATTCAAGTTATGGTATCTTTTGACAGACTCAACACCTTTTTTCTTGAAAATGAGATAGAAAATGAGGATATTGAAAGAAACACAAATCATGATTCAATTTATGGCATCAGAATTCAAGCAGCCAATTTCAGTTGGGATGAGGAACCAATGTCCTTAACTTTGAGAGATGTGAATAAGGGAATCAAATGGGGACAGAAAGTTGCAGTTTGTGGGCCAGTTGGAGCTGGAAAATCATCTCTCTTGTATGCAATACTCAAAGAGATACCCAAAATTTCAGGAAGTGTTAATGTAGGTGGAACGCTTGCCTATGTTTCTCAAACTTCCTGGATCCAAAGTGGGACAATCCGTGATAATATACTTTACGGAAAGCCAATGGACAAAGCCAGATATATGAATGTTGTTAATGTATGTGCCTTGGATAAAGATATTAAAAGCTTTAAGCATGGTGATCTTACAGAAATAGGTCAAAGAGGGGTTAACTTGAGTGGTGGACAAAAGCAAAGGATTCAACTTGCTCGTGCAGTCTATAATGATGCTGACATCTATCTTCTTGATGACCCTTTCAATGCAGTTGATGCACATACAGCTGCAATTCTCTTCCATGATTGTGTCATGACTGCTCTAAAAGAGAAAACAATCATTCTAGTCACTCATCAAGTTGAGTTTCTCTCAGAAGTTGATAAAATTTTGGTAATGGAGGGAGGGAAAGTAATTGAATCAAGTGGTTATGAGGATCTCTTGACAATTGGGACTGCCTTTGAACAACTAGTGAATGTTCATAGAGAAGCAAAAACAGGGGTGAAGGAAAACCAAATGGATCCTGAACAAGTAGATTCAGATAAGCTAGAGGAGTTACATGGTTTTCATCTTGTGAAAGATGAGAATGAGTATGAGACTTCTACTGAGAGACAACTAACACAAGTGGAAGAAAAGGAGATTGGTGATGTTGGCTTGAAGCCATTTTGGGATTATATCTTTATCTATAGGGGATTATTGTTTCTCTTTTTGATAATATTAGCACAATTGGCTTTTGTTGCCTTTCAGGCTGCATCATCTTTTTGGCTAGCTCTAGCCACTAAAACCCCAAAAGTAACCAGTACCATTTTGATTGGAGTTTACACCATTTTTTCATTCCTTAGTGTTGTCTCTGTATACTTCAGGTCCTTTTGTGCTGCATATCTTGGATTAAAAGCCTCTAAAGCCTTCTTCTCTGGTTTTACTAATTCTATCTTCACTGCTCCCATGTTATTCTTTGACTCAACGCCAATGGGGCGGATTTTGACCCGAGCTTCATCAGATTTGAGTATTCTAGACTTTGACATACCTTTCTCTATCAACTTTGTAGTAGCTACAGGAATTGAACTTTTGACAGTGATTGGGATAATGGCTTCCATCACATGGCCAGTCCTCATTGTTGCTATTCTTGCTATGGTGGCTTCAAAATACATTCTGCCTTGTTCTAACAATGGACCTTTCAATGTTGTGTTCCTTTTGTGTGGTCACAAGGGTTATTACCTATCCTCTGCAAGAGAACTAATAAGAATTAATGGAACCACAAAAGCTCCAATTATGAATTTTACAGCTGAGACATCGCTTGGAGTATTAACAATAAGAGCTTTCAACATGGTGGACAGATTTTTCCAAAGCTACCTAAAGCTTGTGGATACAGATGCAACACTCTTCCTTCATTCTAATGCTACCATGGAATGGTTAGCACTAAGGATTGAAATGCTTCAGAATTTGACACTCTTCACTACTGCTTTTTTGCTTGTTTTCCTTCCAAAGGGATATGTGGCTCCTGGCCTTGTGGGACTTACTCTTTCTTATGCTCTGACTCTTACACAAACCCAAATTTTTTGGACCAGATTATCATATAGTCTAAATGGTCCATTAGTCCTAAAGAGAATCACTTGCACGTTTAAAGAAGGGAATAGAGTGGGAGTTGTGGGAAGGACTGGAAGTGGAAAGACAACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCGTGCAGGTGGAGATATTGTTATAGATGGCCTTAACATATGCTCAATGGGGCTCAGAGATTTGAGAATGAAGCTAAGCATTATTCCTCAAGAACCAACTCTGTTCAGGGGTAGTGTTAGAACCAACTTGGATTCCTTAGGCCTATACTCTGATGATGAAATATGGAAGGCTTTGGAGAAATGTCAACTTAAGGCAACAATTAGCAGTCTACCTAAACTGTTGGACTCTTCTGTAAGCGATGAAGGTGAGAATTGGAGTGTAGGGCAACGCCAACTCTTCTGTCTTGGAAGAGTTCTTTTGAAGAGGAACAAAATTCTTGTGCTGGATGAAGCCACTGCTTCCATTGATTCAGCCACAGATGCCATTCTACAAAGAGTTATAAGGCAAAAATTTGAAGAATGCACAGTCATAACTGTGGCTCATAGAGTCCCAACAGTAATAGATAGTGACATGGTCATGGTCCTCTCTTGTGGGGAACTAGTGGAGTATGATGAACCATCAAAGCTTATGAAGACAAACTCTTCATTTTCTAGGCTGGTGGCTGAATATTGGTCTAGCTGCAATAAAAATTCCTCCCAAGTTATTACCAGGCATCAATATTAG 3972 0.3887 MCCALISIIYFSKGLWDLVAKTGDFNRLNWLVTIIRGLVWISLTVSLLVQGSKWIQILNSIWWVSSCTLISALNIENLFKEKTLQIFYTVQWPIHLLLALCAFQNLCYFVSPRVTETDISEPLLFQNIESNETGLGHATFLSKLTFSWINPLLSIGYLKPLALEDIPRIISEDESDSVYQKFAHAWDMLLQERNKNNTKNLVLWSIAKNYLKENLLIALFAFLRTISLVVSPLILYAFVNYANHDEPSMKEGLCIVGYLIITKLIESLSQRHWFFNARRSRMRMRSALMVAIYKKQLKLSSLARKNAFHRGDCLGAIPGLVPLLVCGLLNVPFAKVLQKCQSEFMIAQDERLRSTSEILNTMKIIKLQLWEDKFKNLVELLRSKEVKCLAKAQFMKAHGTLMYWMSPTVISSIIFLVCAIFQCAPLNAETIFTVLATLRIMSEPVRMIPEALSVMIQVMVSFDRLNTFFLENEIENEDIERNTNHDSIYGIRIQAANFSWDEEPMSLTLRDVNKGIKWGQKVAVCGPVGAGKSSLLYAILKEIPKISGSVNVGGTLAYVSQTSWIQSGTIRDNILYGKPMDKARYMNVVNVCALDKDIKSFKHGDLTEIGQRGVNLSGGQKQRIQLARAVYNDADIYLLDDPFNAVDAHTAAILFHDCVMTALKEKTIILVTHQVEFLSEVDKILVMEGGKVIESSGYEDLLTIGTAFEQLVNVHREAKTGVKENQMDPEQVDSDKLEELHGFHLVKDENEYETSTERQLTQVEEKEIGDVGLKPFWDYIFIYRGLLFLFLIILAQLAFVAFQAASSFWLALATKTPKVTSTILIGVYTIFSFLSVVSVYFRSFCAAYLGLKASKAFFSGFTNSIFTAPMLFFDSTPMGRILTRASSDLSILDFDIPFSINFVVATGIELLTVIGIMASITWPVLIVAILAMVASKYILPCSNNGPFNVVFLLCGHKGYYLSSARELIRINGTTKAPIMNFTAETSLGVLTIRAFNMVDRFFQSYLKLVDTDATLFLHSNATMEWLALRIEMLQNLTLFTTAFLLVFLPKGYVAPGLVGLTLSYALTLTQTQIFWTRLSYSLNGPLVLKRITCTFKEGNRVGVVGRTGSGKTTLISALFRLVERAGGDIVIDGLNICSMGLRDLRMKLSIIPQEPTLFRGSVRTNLDSLGLYSDDEIWKALEKCQLKATISSLPKLLDSSVSDEGENWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAILQRVIRQKFEECTVITVAHRVPTVIDSDMVMVLSCGELVEYDEPSKLMKTNSSFSRLVAEYWSSCNKNSSQVITRHQY 1323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1748 1323 Gene3D ABC transporter type 1, transmembrane domain 751 1079 IPR036640 GO:0005524|GO:0016020
Bisa06g1748 1323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1077 1304 IPR027417 -
Bisa06g1748 1323 Gene3D - 1080 1309 IPR027417 -
Bisa06g1748 1323 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 316 457 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1748 1323 CDD ABC_6TM_ABCC_D1 216 465 IPR044746 GO:0140359
Bisa06g1748 1323 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1068 1305 IPR003439 GO:0005524
Bisa06g1748 1323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 714 IPR027417 -
Bisa06g1748 1323 FunFam Multidrug resistance protein associated1 470 734 - -
Bisa06g1748 1323 ProSitePatterns ABC transporters family signature. 616 630 IPR017871 GO:0005524|GO:0016887
Bisa06g1748 1323 Gene3D - 489 721 IPR027417 -
Bisa06g1748 1323 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 316 1073 - -
Bisa06g1748 1323 CDD ABC_6TM_ABCC_D2 795 1079 IPR044726 GO:0140359
Bisa06g1748 1323 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 491 714 IPR003439 GO:0005524
Bisa06g1748 1323 Pfam ABC transporter 509 644 IPR003439 GO:0005524
Bisa06g1748 1323 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 790 1070 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1748 1323 CDD ABCC_MRP_domain2 1078 1289 - -
Bisa06g1748 1323 Gene3D ABC transporter type 1, transmembrane domain 190 477 IPR036640 GO:0005524|GO:0016020
Bisa06g1748 1323 Pfam ABC transporter 1088 1236 IPR003439 GO:0005524
Bisa06g1748 1323 Pfam ABC transporter transmembrane region 319 442 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1748 1323 Pfam ABC transporter transmembrane region 787 932 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1748 1323 CDD ABCC_MRP_domain1 491 691 - -
Bisa06g1748 1323 SUPERFAMILY ABC transporter transmembrane region 774 1082 IPR036640 GO:0005524|GO:0016020
Bisa06g1748 1323 SUPERFAMILY ABC transporter transmembrane region 203 465 IPR036640 GO:0005524|GO:0016020
Bisa06g1748 1323 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 215 300 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1748 1323 FunFam Multidrug resistance-associated protein member 4 1069 1306 - -
Bisa06g1748 1323 SMART AAA_5 518 691 IPR003593 GO:0016887
Bisa06g1748 1323 SMART AAA_5 1097 1289 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1748 Bisa-ChrBisa06 58327299 58335458 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1748 479 729 Calmodulin-binding Proteins AT2G36910 26.087 2.42e-20 96.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1748 06 58327299 58335458 Bisa06g1748 06 58327299 58335458 ECH