LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa06g1745	ATGAGAGGAAGACTTTGGCAGGTCGGAAAACTACGGGACAGGATCCGGGTTACGTGGCGCCAAAATCGATTACGGCAAGACGACGTCGCAGAGTCGCACTCTGAAGTCCGATCTAATCCACATATCCCTCACGGGGCAACCAGACGGAAAACGTTTGTCATCGGGAAAGGTTCCGAACGAAGGGTAGAGAGGGTGACGAGACTGACGGCGACCGGTAACGGCGCGTGGGTCCCACGTGTGGGGGGACGAGGGTGGTACCACTGTTCCCTCTGTGGGGTTGGGCGTTTCGGAGTTGGGGGTCTTCGATTTGATTTCAATGCTAAGGGGTTAAAATTTGAGGCTGAACTTTCATTGCGTCAGAGAGCTATACTAAAAGACCTCTATTTTCAGTCGTACTGATATTTTGTATTTACTTTTTGGGGATTGTTGGTGCTGATGGATCGAGAACAGAAGCGAGGGAAGCAAGAAAAGGGTTCTGATGGTCCTGAGAAGGTCATTGTTGCCGTCAAGGCATCAAAGGAAATTCCTAAGGCTGCTCTTGTCTGGTCTCTAACTCATGTTGTTCAACCTGGGGATTGCATAACTTTGTTAGTGGTTGTGCCTCCACAAAGTTCAGGTAGAAGACTATGGGTATTTCCGAGATTTGCTGGTGATTGCGCCAGCGGTAACAAGAAATCTCCTTCAGGAACAAGTTCAGAGCAAAAGTGTGATATAACTGATTCTTGTTCTCAGATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCGGGATCACCTTGTGGAGCTGTAGCTGCCGAGGCCAAGAAAGCCCAAGCCAGTTGGGTCGTCTTAGACAAACAGCTCAAACATGAGGAAAAACGATGCATGGAAGAGCTTCAGTGTAACATTGTGTCTATGAAGCGTTCTCAACCGAAAGTACTCCGCTTGAATTTAGTTGGACCACAGAAAAAGGATCTTCAAGAAGCCAGTCCATTACCTTCTAAGCAAGATGAGGTAGCCGGTAAACAAGCCAAACCGAAGAATGAACCTTTAAATTCTATAAAAGCACCAGTTGTCACTCCAACTAGCAGCCCAGAGCTAGGGACACCATTTACAGCAACTGAAGCTGGTACCTCATCAGTTTCAAGCTCAGATCCTGGAACGTCACCATTTTTTGTCTCTGAGATGAATGGTGAGCTAAAAAGAGAGGAAACAATCCAAGAAAATCAGGAACTTGATGATACTAATTCGGACACGGACAGTGAAAATATGTCCTCATCCTCAGCAAGCTTGAGATTCCAGCCGTGGATCACAGATTTACTCTTGCATCAACGGTCATCTCAACAACACATGGAACAAAGATCTGAGAGATCTCATGATAAGCATCAAACATCCACCACCAGAGCGTTGCTAGAGAAGTTCTCAAGACTTGAGAGGGAATCTGGAATTGAAACCTCAACCTATAGAAGTGACTTGGATTTCAGCGGAAATGTAAGAGAAGCAATAGCATTATCCAGAAATGCCCCTCCTGGTCCGCCTCCATTATGTTCAATATGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCAAGATGGTTCAGTTATGCCGAGTTGGAGCTTGCCACTGGTGGATTTTCACAAGTCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTCCACAGAGGTGTTCTACCAGATGGGCAAGTTATTGCTGTGAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTTTGCGCGGAGGTAGAAGTCTTAAGCTGTGCACAGCATCGGAATGTTGTTATGCTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCACTGGATTCTCATTTATATGGGAGACAACAGGAGGCATTAGAGTGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGCTGCGATATCTTCATGAAGAGTGCAGGGTAGGTTGCATTATCCACCGTGACATGCGGCCAAACAACATTCTCATCACTCATGATTTTGAGCCACTGGTTGGTGATTTTGGTCTGGCAAGGTGGCAGCCTGACGGAGACACAGGAGTGGAAACTCGTGTAATTGGAACCTTTGGGTATTTAGCTCCAGAATATGCTCAAAGTGGCCAAATCACCGAAAAGGCTGACGTTTATTCCTTTGGCGTGGTACTTGTGGAGCTTGTTACTGGTCGAAAAGCTGTGGATCTCAATCGGCCTAAAGGACAGCAGTGTCTTACTGAGTGGGCCCGGCCGCTGTTAGAAGACTATGCCATCGAGGAACTGATTGATCCAAGGCTCGGAAATTGCTATTCTGAAGATGAGGTCTATTGCATGCTGCATGCTGCTTCATTATGTATTCGGCGAGATCCTCAGTTTAGACCCCGCATGTCACAGGTTCTCCGAATACTCGAAGGTGACATGGTTGTGGACACAAATTACCTATCAACTCCCAGTTACGATGCTGGGAACCGGAGCGGCCGAATCTGGGCAGAGCAGCAGAGGCAGCACCATTACAGTGGTCCCCTGTCGAACGAGCCACTGGAATCATCGTTCAGTGGGAAGCTGTCTCTGGAGAAATACAGGTCTGCCTATTGGGAAAGGGACAAGCCCAGGCGAGCTTCATGTGAAGATGATATGTGA	2685	0.467	MRGRLWQVGKLRDRIRVTWRQNRLRQDDVAESHSEVRSNPHIPHGATRRKTFVIGKGSERRVERVTRLTATGNGAWVPRVGGRGWYHCSLCGVGRFGVGGLRFDFNAKGLKFEAELSLRQRAILKDLYFQSYXYFVFTFWGLLVLMDREQKRGKQEKGSDGPEKVIVAVKASKEIPKAALVWSLTHVVQPGDCITLLVVVPPQSSGRRLWVFPRFAGDCASGNKKSPSGTSSEQKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAQASWVVLDKQLKHEEKRCMEELQCNIVSMKRSQPKVLRLNLVGPQKKDLQEASPLPSKQDEVAGKQAKPKNEPLNSIKAPVVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFVSEMNGELKREETIQENQELDDTNSDTDSENMSSSSASLRFQPWITDLLLHQRSSQQHMEQRSERSHDKHQTSTTRALLEKFSRLERESGIETSTYRSDLDFSGNVREAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQVNFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDLEFCAEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQQEALEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEDYAIEELIDPRLGNCYSEDEVYCMLHAASLCIRRDPQFRPRMSQVLRILEGDMVVDTNYLSTPSYDAGNRSGRIWAEQQRQHHYSGPLSNEPLESSFSGKLSLEKYRSAYWERDKPRRASCEDDM	894

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa06g1745	894	MobiDBLite	consensus disorder prediction	445	470	-	-
	Bisa06g1745	894	ProSiteProfiles	Protein kinase domain profile.	548	829	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g1745	894	Gene3D	Transferase(Phosphotransferase) domain 1	624	829	-	-
	Bisa06g1745	894	MobiDBLite	consensus disorder prediction	321	433	-	-
	Bisa06g1745	894	Gene3D	Phosphorylase Kinase; domain 1	520	623	-	-
	Bisa06g1745	894	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	669	681	IPR008266	GO:0004672\|GO:0006468
	Bisa06g1745	894	MobiDBLite	consensus disorder prediction	358	394	-	-
	Bisa06g1745	894	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	624	827	-	-
	Bisa06g1745	894	MobiDBLite	consensus disorder prediction	452	470	-	-
	Bisa06g1745	894	CDD	STKc_IRAK	554	820	-	-
	Bisa06g1745	894	FunFam	Dual-specific kinase DSK1-like	156	310	-	-
	Bisa06g1745	894	Pfam	Protein tyrosine and serine/threonine kinase	552	816	IPR001245	GO:0004672\|GO:0006468
	Bisa06g1745	894	PANTHER	OS01G0750732 PROTEIN	304	825	-	-
	Bisa06g1745	894	SUPERFAMILY	Protein kinase-like (PK-like)	532	832	IPR011009	-
	Bisa06g1745	894	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	520	623	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa06g1745	Bisa-ChrBisa06	58183337	58192782	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa06g1745	488	814	Trihelix Transcription Factor Family	AT1G68690	51.205	7.23e-100	324

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Bisa06g1745		PK_Tyr_Ser-Thr	3.1e-40	CL0016