Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1743 ATGGAGAAAAAACCTGAGCTCCTCCATGGGACAATTGAAGTCACCATCTTCAATGCCACTCCTCATGCATCTGCATTTCCCTTCAATTGTATATGCCCAAATTGGAAGCCTGCATATGTGACCATCAAGCTAGGCAACAAGAAGGCAGCACAGACAAGTCAAGAACGTGATCGTGTGTGGAACCAAACCTTTCAGATCCAATGTGCTCACTCAGCTGACACAATTATCATACTTACATTAAAAACATCTTGCTCCATATTGGGGAGATTCCACATTCAGGCCCAGAAGTTACTTGAGGAAGAAAGTTTCATCAATGGCTTCTTCCCTCTCCATATGGAAAATGGAAAACCAAACCATCAACTCAAATTAAGATTTATGTTGTGGTTCAAATCAGCAGAACTAGAACCGAGCTGGGAAAAGCTGCTCAGTAATGGTGAACATCAAGGACTGAGGGATGCAACATTTCCGCAAAGGTCAAATTGTCAGGTCAAGCTTTACCATGATGCTCATCATTCTTCTTCATTTCAACCTCCTTTTAATCTATGTGGAGATCCAAGAAGGCTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTACTTGATTTATATTGCAGGCTGGTCCTTCAATCCCAACATGGCTCTGGTTAGAGATTCCGATACAGAAATCCTACATGCAAGAGGAGTGAAGCTGGGTGAGGCTGCTTGGGATGTGTTAACAAATTTTGAGCAGAGATGGACTAAACAGTGTGATCCTTCCCTTTTAGTCCCTGCTAGTGCCTTAGTCAATCTCATTCCCCAGACGTGCTCAAGCACTCCAATTGAGAGGAATTGGAAAGTTCAAGTATATAGGTCAATTGACCATGTCTCTGCTAGTCAATTGTTTAGAAAGCTTACTGTGGAGAGGAGCATCCATGAAGCTTATGTTGAAGCAATTAGGCGTGCTGATAGGAGGTTCATGGTGTATGTCCACTCCAAGCTCATGATAGTGGACGATCTGTACTTGTTGATAGGGTCAGCCAACATCAATCAGAGATCTATGGACGGGCAAAGAGACACCGAGATGGACATAGGATGCTACCAATCTCAAGACGGTGATTCCGATAACCAAATTAATCGTCGCGGTGAGATTCACGCATACAGAATGTCGCTGTGGTACGAGCACAGTGGTTGCTCAGAGGAACTATTGATGGAACCAGAAAGTTTGGAATGCGTGCAGAAAATACGATCGATAGGAGATCGAATGTGGGGAATATACAGCGGCGAGGAAATTGTGGACATGGAAGGCGTTCATCTGGTGAGCTACCCAGTGAAGGTGACGCAGGAAGGTTGCGTGGAGGAGGTCGGTGAAAACGGAGGTCGTTTTCCTGATACAGAGTGTCCAGTGAAGGGGAATCGATCCAAAGTGTTGCCTTCCATCTTCACTACTTAG 1434 0.447 MEKKPELLHGTIEVTIFNATPHASAFPFNCICPNWKPAYVTIKLGNKKAAQTSQERDRVWNQTFQIQCAHSADTIIILTLKTSCSILGRFHIQAQKLLEEESFINGFFPLHMENGKPNHQLKLRFMLWFKSAELEPSWEKLLSNGEHQGLRDATFPQRSNCQVKLYHDAHHSSSFQPPFNLCGDPRRLWEDVYKAIEGAKYLIYIAGWSFNPNMALVRDSDTEILHARGVKLGEAAWDVLTNFEQRWTKQCDPSLLVPASALVNLIPQTCSSTPIERNWKVQVYRSIDHVSASQLFRKLTVERSIHEAYVEAIRRADRRFMVYVHSKLMIVDDLYLLIGSANINQRSMDGQRDTEMDIGCYQSQDGDSDNQINRRGEIHAYRMSLWYEHSGCSEELLMEPESLECVQKIRSIGDRMWGIYSGEEIVDMEGVHLVSYPVKVTQEGCVEEVGENGGRFPDTECPVKGNRSKVLPSIFTT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1743 477 SMART pld_4 320 347 IPR001736 GO:0003824
Bisa06g1743 477 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 125 IPR035892 -
Bisa06g1743 477 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 320 347 IPR001736 GO:0003824
Bisa06g1743 477 PANTHER PHOSPHOLIPASE D 233 317 IPR015679 -
Bisa06g1743 477 Gene3D Endonuclease Chain A 149 367 - -
Bisa06g1743 477 Pfam C2 domain 38 109 IPR000008 -
Bisa06g1743 477 Pfam Phospholipase D C terminal 395 466 IPR024632 -
Bisa06g1743 477 Pfam PLD-like domain 194 355 IPR025202 -
Bisa06g1743 477 Gene3D C2 domain 2 133 IPR035892 -
Bisa06g1743 477 SUPERFAMILY Phospholipase D/nuclease 150 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1743 Bisa-ChrBisa06 58144548 58148339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1743 317 477 Phospholipase D Gene Family (Wang group) AT1G55180 61.212 8.10e-59 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1743 06 58144548 58148339 Bisa06g1743 06 58144548 58148339 ECH