Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1733 ATGTATCGAATAGCTTCCAAATTAGCTTCGTCCATCAGTTCCTCCTCATCGACGAGAAAACTAGTAAGTAGTCGAATTATATCAAGCAGAAATTATGTGGCGAAAGATATCAGCTTTGGAATTGGGGCTCGTGCTGCTATGCTCCAGGGGGTTTCTGAGGTTGCAGCGGCTGTAAAAGTAACCATGGGCCCCAAGGGTCGCAATGTGATTATTGAGAGAAGTCATGGAAGCCCCAAGATCACAAAGGACGGAGTGACTGTAGCCAAAAGTATCAAATTTAAAGACAAAGCAAAAAATGTTGGTGCTGATCTTGTGAAGCAGGTGGCTAAGGCTACCAATACTGCTGCTGGGGATGGTACAACTTGTGCAACTGTTCTGACTCAGGCAATACTCACAGAAGGTTGCAAATCAATTGCTGCAGGTGTAAATGTCATGGATTTGCGTAATGGTATAAATAAGGCAGTTGATGCTGTAATTACAGATTTAAAAAGCAGAGCATTAATGATTAGCACACAGGAAGAAATAACTCAGGTTGGAACTATATCTGCAAATGGAGATCGTGATATTGGAGAACTTATTGCAAGAGCAATGGAGAAAGTTGGAAAGGAAGGAGTCATTACTGTTGCTGATGGGAACACCTTGGATAATGAGTTGGAAGTGGTAGAAGGAATGAAGCTAACCAGAGGCTGCATATCTCCTTATTTTATTACTGATCATAAGACCCAGAAATGTGAATTGGAGAACCCCCTTATCCTCATCCATGAGAAGAAAATATCAGACATGAACTCACTGGTGAAAATATTGGAGCTGGCAGTCGAGAAAAATAGACCACTTCTTGTTGTTGCGGAGGATATTGAGAGTGATGCTTTGGCTATGCTCATACTCAACAAGCATCATGCTGGGCTTAAGGTTTGTGCTATTAAAGCTCCTGGTTTTGGCGAAAATAGAAAAGCAGGTTTAGATGATCTTGCCATTCTTACCGGAGGAGAGGTCATTACAGAAGAACGAGGTTTGACCCTTGACAAAGTCCAACTAGGAATGCTTGGTACTGCAAAAAAGGTTACTGTCTCTCTTGATGACACTATTATTCTACATGGTGGTGGGGACAAGAAGCTCATTGAAGATAGATGTGATCAGCTCAGGGCAGCAATGGAAAAGAGTACTGCCACATTTGATAAAGAGAAAGCACAGGAACGGCTATCAAAGTTATCTGGTGGTGTTGCTGTTTTCAAGGTTGGAGGGGCTAGTGAGGCAGAAGTTGGGGAAAGGAAAGATCGGGTGACAGATGCTTTAAATGCTACTAAAGCAGCTGTGGAGGAAGGAATTGTTCCAGGTGGTGGGGTTGCTCTCTTATATGCTAGCAAAATATTGGAGAACCTTCATACCCAAAATGAGGATGAGAAGAGAGGAGTGCAGATCATTCAGAATGCACTTAAGGCACCGACATTCACAATAGCTTCTAATGCTGGTTTTGATGGTGCTTTGGTTCTCGGAAAATTGTTGGAACAAGACAATCACAATTGGGGTTTTGATGCTGCAAAAGGTGCCTATGTTGATATGGTGAAGTCTGGAATCATAGATCCTCTTAAAGTTGTCAGAACAGCTTTGGGAGATGCTGCCAGTGTGTCATTGCTACTGACAACAGCTGAAGCATCTGTGGTGGACGATCAGAATGACAAAAATAAACCTCCCAGCAGGGTGCCTGATATGGATGATTTGGGATACTAA 1728 0.4271 MYRIASKLASSISSSSSTRKLVSSRIISSRNYVAKDISFGIGARAAMLQGVSEVAAAVKVTMGPKGRNVIIERSHGSPKITKDGVTVAKSIKFKDKAKNVGADLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSIAAGVNVMDLRNGINKAVDAVITDLKSRALMISTQEEITQVGTISANGDRDIGELIARAMEKVGKEGVITVADGNTLDNELEVVEGMKLTRGCISPYFITDHKTQKCELENPLILIHEKKISDMNSLVKILELAVEKNRPLLVVAEDIESDALAMLILNKHHAGLKVCAIKAPGFGENRKAGLDDLAILTGGEVITEERGLTLDKVQLGMLGTAKKVTVSLDDTIILHGGGDKKLIEDRCDQLRAAMEKSTATFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATKAAVEEGIVPGGGVALLYASKILENLHTQNEDEKRGVQIIQNALKAPTFTIASNAGFDGALVLGKLLEQDNHNWGFDAAKGAYVDMVKSGIIDPLKVVRTALGDAASVSLLLTTAEASVVDDQNDKNKPPSRVPDMDDLGY 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1733 575 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 31 564 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 NCBIfam chaperonin GroEL 34 558 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 Gene3D - 37 554 IPR027413 -
Bisa06g1733 575 SUPERFAMILY GroEL apical domain-like 215 407 IPR027409 -
Bisa06g1733 575 Pfam TCP-1/cpn60 chaperonin family 54 547 IPR002423 GO:0005524
Bisa06g1733 575 SUPERFAMILY GroEL-intermediate domain like 169 226 IPR027410 -
Bisa06g1733 575 PRINTS 60kDa chaperonin signature 381 406 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 PRINTS 60kDa chaperonin signature 114 141 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 PRINTS 60kDa chaperonin signature 429 450 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 PRINTS 60kDa chaperonin signature 299 322 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 PRINTS 60kDa chaperonin signature 58 84 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 CDD GroEL 35 555 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 MobiDBLite consensus disorder prediction 555 575 - -
Bisa06g1733 575 FunFam 60 kDa chaperonin 223 404 - -
Bisa06g1733 575 Hamap Chaperonin GroEL [groEL]. 33 575 IPR001844 GO:0042026|GO:0140662
Bisa06g1733 575 Gene3D - 168 441 IPR027410 -
Bisa06g1733 575 ProSitePatterns Chaperonins cpn60 signature. 436 447 IPR018370 GO:0005524|GO:0006457
Bisa06g1733 575 Gene3D GroEL 223 404 IPR027409 -
Bisa06g1733 575 SUPERFAMILY GroEL equatorial domain-like 38 551 IPR027413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1733 Bisa-ChrBisa06 57850644 57856600 Transposed