Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1716 ATGATGACAGGTTTGATGTTCCATCATCAACAACAGCAGCAGCAGCAACAAGTAGTGGAGGAGAACAGGTCTAATTTGGCTGTTTCTGTATCTGGTGAAACTACTGTTTCGATTAATACTACAAATTATCCTCATCAACATCAACAATACTTAGCTCCACCATCATCGTCCACTTCAAGTCAATCTCAGCCAGTGAAGAAGAAGAGAAACCTCCCTGGTAACCCAGACCCAGATGCAGAAGTGATCGCCTTGTCGCCGACGAGTCTTCTAGCGACGAACAGGTTCATATGCGAGGTGTGCAACAAGGGGTTCCAGAGAGACCAGAATCTGCAGCTACACAGGCGAGGGCACAACCTGCCATGGAAGCTGAAGCAGCGAGGGACGAGCAAGGAGGCGACGAGGAAGAAGGTGTACGTGTGCCCGGAGGCGACGTGCGTGCACCACGCGCCGGCGAGGGCGCTGGGGGACCTGACGGGGATAAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGATAAGTGCTCGAAGAAGTACGCCGTCCAGTCCGATTGGAAGGCGCACTCTAAGACCTGTGGGACGAGAGAGTATCGCTGTGACTGTGGTACCCTCTTCTCTAGGAGGGACAGCTTCATAACCCACAGAGCCTTCTGTGATGCATTAGCAGAAGAGAGTGCCAGAGCAGGAAACCCACTAATAATGCTTCCTTCTCAACTCCATCATCCTCAACCTCAGCAACCACACTTCCTTAATAATAATATCAATGATCTCCAAACCCAGACATTGAATTTGAACCCCATCCTTACCTCTTCTTTGAAAAAAGAGCACCATATATTACCCCCTTGGCTTGAACCACCCTCCACCACCGTAGATCACCGCCGTCGAGATGGTGGTGGTCACGTGACCATGAGCCTTCCCCTCACTGAAAACCCTAACCCTAACCCTAAGCCTTCCTACCATCTATCACCTCCTTCCCCACACATGTCAGCCACGGCCTTGCTTCAGAAAGCAGCTCAGATGGGTGCCACCATCAGCAAGACCAGCTCAGTCCTTCTCAGGACCCACCAAGACCAACAACATCACCACCCTCCTCACGTGACTGCCTCTCCTGCTTTCAACTTGTCCCCACTTGCAGATCACGTGACCATGTCTATGACCACCACCACCGCCTCCTCCACCTTCTCTCATGTCCATGGCAGCTTTCTTCCTCCTGATGATGATGGTCGCTTCGAAGGAGCTCATTCTTTTGACACTGCATTCATTGCTGGGAATATTTTTAATTCCAACAAAGATGGAAATTACATGAATGGTGGCAGCACCGCCAAAAATGGCCGTGGCGGTGGTGGGAACGAGGGTTTGACGAAGGATTTCTTGGGTCTTAGACCTTTGGCCCATGGTGATATTCTCGGCATTGCTGGTATTGGAAGCTGCGTCGGCTCCTCCCATGATCAACAAAATTATCAGTCCCAAAAACCATGGCAAGGTTAA 1497 0.5084 MMTGLMFHHQQQQQQQQVVEENRSNLAVSVSGETTVSINTTNYPHQHQQYLAPPSSSTSSQSQPVKKKRNLPGNPDPDAEVIALSPTSLLATNRFICEVCNKGFQRDQNLQLHRRGHNLPWKLKQRGTSKEATRKKVYVCPEATCVHHAPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAGNPLIMLPSQLHHPQPQQPHFLNNNINDLQTQTLNLNPILTSSLKKEHHILPPWLEPPSTTVDHRRRDGGGHVTMSLPLTENPNPNPKPSYHLSPPSPHMSATALLQKAAQMGATISKTSSVLLRTHQDQQHHHPPHVTASPAFNLSPLADHVTMSMTTTTASSTFSHVHGSFLPPDDDGRFEGAHSFDTAFIAGNIFNSNKDGNYMNGGSTAKNGRGGGGNEGLTKDFLGLRPLAHGDILGIAGIGSCVGSSHDQQNYQSQKPWQG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1716 498 MobiDBLite consensus disorder prediction 1 20 - -
Bisa06g1716 498 MobiDBLite consensus disorder prediction 46 68 - -
Bisa06g1716 498 Gene3D Classic Zinc Finger 76 146 - -
Bisa06g1716 498 FunFam protein indeterminate-domain 12-like 74 144 - -
Bisa06g1716 498 Pfam Zinc-finger double-stranded RNA-binding 95 117 IPR022755 -
Bisa06g1716 498 ProSiteProfiles Zinc finger C2H2 type domain profile. 95 117 IPR013087 -
Bisa06g1716 498 FunFam protein indeterminate-domain 5, chloroplastic-like 151 230 - -
Bisa06g1716 498 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 46 479 IPR031140 -
Bisa06g1716 498 Gene3D Classic Zinc Finger 151 230 - -
Bisa06g1716 498 SUPERFAMILY beta-beta-alpha zinc fingers 94 193 IPR036236 -
Bisa06g1716 498 ProSitePatterns Zinc finger C2H2 type domain signature. 97 117 IPR013087 -
Bisa06g1716 498 MobiDBLite consensus disorder prediction 46 79 - -
Bisa06g1716 498 MobiDBLite consensus disorder prediction 282 332 - -
Bisa06g1716 498 SMART c2h2final6 95 117 IPR013087 -
Bisa06g1716 498 SMART c2h2final6 138 168 IPR013087 -
Bisa06g1716 498 SMART c2h2final6 173 193 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1716 Bisa-ChrBisa06 57635194 57639105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1716 19 484 IDZ Gene Family AT1G55110 47.280 2.40e-121 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa06g1716 zf-C2H2_jaz 8.5e-05 CL0361