Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1712 ATGGATACTATTCCTCCTTTCTTTTGGCCAGTTATGGCGTCTTCTTCTTCTTCATCCCGTGTTACTCAAATAAAACATGATGTGTTCATTAGCTTTAGAGGTTCAGACATTAGACATGGTTTTCTCAGCCATTTGACAAGGGGACTACGTCATAAGCAAATTGATGTCTATGTAGACGAGAGAATTGAGAGAGGAGACGAAATATCATCCTCACTTCTCAAAGCAATTGAAGCATCAGAAATTTCATTGATCATATTCTCAAAACACTATGCTTTTTCAAAGTGGTGCTTGGAAGAGCTTGTGAAAATCGTGGAATGCCAAGAAGCCAATGGCCAAATTGTAATACCAGTTTTCTACAATATAGATCCATCACATGTACGACACCAAGAAGCCACTTATGGGGATGCATTTGTTAAACATGAAGAAATGTTCAAGAACAATATGGAGAAGCTGCAAATTTGGAGATCCAACTTGACCAAAGTTGCTAACTTATCTGGCTATCATTATTCATCAAATTTTGAGAGTGAATACAAACTCATTGATGAGATAGTTCAAGATGTCTTGAAAAAATTGGATGATACTTGCCCAATTGCACCAGAACATCTGATTGGATTTTATCGGAACTTTGCCTGTGTTGAACAACTATTGAAAATCAAGTCCCAAGAAGTTCGAATTCTTGGAATTTGGGGCATGGGAGGCATAGGGAAAACAACCCTTGCTCGTGTTGTATGCAAAAAATTTTCTTCTCAATTTGAAAGTTGTTGCTTCCTGGAAAATGTTAGAGAAGAATCAAAGCAAAATAATGGATTGCGTTATTTGCTTCAAAAGCTTCTATTTGAGCTATTAGATGAAGAAAATATCAATATGAATGATGCAGTGAATGCAAGATCCATTAGGAGAAGATTACGTCGCAAAAAAGTTCTTATTGTGCTTGATGATGTGGACAGTTCAGAGCAATTAGCATACCTAATTAAAGAGCATCTTTGTTTGGGAGCAGATTTCAAACAAGTAATTGGTAAAATGGAGCTACACAGCCTATTTGATGGCTTGCGTTCTTTAAGAGAACTATGGCTGGTTGGATGTGATAAGATAGCAGAAATTCCTGACAATATCAGTGCCTTAACTTTGTTAGAAGAGTTATCACTTGAGAGAAGCAATTTGGAGAGCTTGCCTGCTAGCATTGGGTGTCTTTCAAAGCTAAAATCGAATGACTTCTTAAACAGAAACAGAAACAAGGTTGTTGAAGATGGCAATCAGCTTGACCTATTGGTGGATTTAGAAGGAGGAAAATATCTTTTGGTGAGAGTCTTATCAGTCTATTTCTTGTATAATAGAGCAGTACATGGAGTTCATATTGTAATTTATGGTTCTTTACTTGAAAGCCCCCTGTTTCTTCCTGGTTGTGGTCAAGGATGA 1416 0.3708 MDTIPPFFWPVMASSSSSSRVTQIKHDVFISFRGSDIRHGFLSHLTRGLRHKQIDVYVDERIERGDEISSSLLKAIEASEISLIIFSKHYAFSKWCLEELVKIVECQEANGQIVIPVFYNIDPSHVRHQEATYGDAFVKHEEMFKNNMEKLQIWRSNLTKVANLSGYHYSSNFESEYKLIDEIVQDVLKKLDDTCPIAPEHLIGFYRNFACVEQLLKIKSQEVRILGIWGMGGIGKTTLARVVCKKFSSQFESCCFLENVREESKQNNGLRYLLQKLLFELLDEENINMNDAVNARSIRRRLRRKKVLIVLDDVDSSEQLAYLIKEHLCLGADFKQVIGKMELHSLFDGLRSLRELWLVGCDKIAEIPDNISALTLLEELSLERSNLESLPASIGCLSKLKSNDFLNRNRNKVVEDGNQLDLLVDLEGGKYLLVRVLSVYFLYNRAVHGVHIVIYGSLLESPLFLPGCGQG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1712 471 ProSiteProfiles TIR domain profile. 24 191 IPR000157 GO:0007165
Bisa06g1712 471 Gene3D - 23 188 IPR035897 -
Bisa06g1712 471 PRINTS Disease resistance protein signature 225 240 - -
Bisa06g1712 471 PRINTS Disease resistance protein signature 301 315 - -
Bisa06g1712 471 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 167 IPR035897 -
Bisa06g1712 471 SUPERFAMILY L domain-like 343 402 - -
Bisa06g1712 471 Gene3D - 189 335 IPR027417 -
Bisa06g1712 471 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 331 IPR044974 GO:0006952
Bisa06g1712 471 FunFam Disease resistance protein (TIR-NBS-LRR class) 22 193 - -
Bisa06g1712 471 Gene3D Ribonuclease Inhibitor 336 428 IPR032675 -
Bisa06g1712 471 SMART till_3 25 164 IPR000157 GO:0007165
Bisa06g1712 471 Pfam NB-ARC domain 213 320 IPR002182 GO:0043531
Bisa06g1712 471 Pfam TIR domain 25 196 IPR000157 GO:0007165
Bisa06g1712 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 328 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1712 Bisa-ChrBisa06 57563905 57569761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1712 26 315 WRKY Transcription Factor Family AT4G12020 31.058 9.98e-29 118