Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1703 ATGGGTCATCACTCTTGCTGCAACAAGCAGAAGGTGAAAAGAGGATTATGGTCTCCTGAAGAAGACGAGAAACTCATCAACTACATCACCACTTATGGCCATGGCTGCTGGAGCTCTGTCCCTAAACTTGCAGGGCTCCAAAGATGTGGAAAGAGTTGCAGGTTAAGGTGGATAAATTACTTAAGACCTGATTTGAAACGTGGAAGCTTCTCTCCTCAAGAAGCAGCCCTCATTATCGAACTCCATAGCATTCTAGGCAACAGGTGGGCTCAGATAGCGAAACACCTTCCTGGAAGAACAGACAACGAAGTGAAGAACTTTTGGAACTCAAGCGTGAAGAGGAAGCTCCTTTCTCATCACTATGATCATCATCATCTTCTTCTTCCTTCTTTGCCCAGTCCTACCACTAACAGTTCCATGGAAACCTTCTTCCCTCTCACAACTCCAAACCCTAATCCCAATCACACTTTGATCCCAAACGCTTATCATCATCACCAGCTATACCTTCCCAGTGCCACACCATCACCATCTCTTCCTCAAGGTCTCGAGTTTGATCACGAGCCTCAAGATCTCAAGATTCCCAATTTCCATTATGTTCAGAACCCTAAACACAACATCAATATTCCATCTTCATCATCTTGTTACGAAAATACATGGCCATTGGTGAATCAACAAAATCATGATCAAGTTGCAAAAAGTGATTATATTTTGGACAAATTATTCACGAATCCAAGCCAGTTGGTAGATGATCCTAACATTGAAGAAACAAAAGTGTTTGAGGATTATAGTAATGTCTGTGGCATCCCATATTCGTCTTCTTCATCTGCTTCACAAGAACACGATCATCATGACCCTCTCGTTTATGATCCATCGTCTGGCTTTGAATATTACCCACAGGACCAAAGTCAAACTGCTGACGTGGCACCCCACCACATGGAGTACATAGATGCCATCGTGTCATTGTTGTCATCGTCTTCATCATCATCATCATCATCATCATCATCATCTGTGTTATCGAACAGCCAAATTTTCAGAAACCTCCCTGTTAATCTTCCATCAAGCTGGGAGCCTTGA 1074 0.4292 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSVKRKLLSHHYDHHHLLLPSLPSPTTNSSMETFFPLTTPNPNPNHTLIPNAYHHHQLYLPSATPSPSLPQGLEFDHEPQDLKIPNFHYVQNPKHNINIPSSSSCYENTWPLVNQQNHDQVAKSDYILDKLFTNPSQLVDDPNIEETKVFEDYSNVCGIPYSSSSSASQEHDHHDPLVYDPSSGFEYYPQDQSQTADVAPHHMEYIDAIVSLLSSSSSSSSSSSSSSVLSNSQIFRNLPVNLPSSWEP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1703 357 FunFam MYB transcription factor 6 66 - -
Bisa06g1703 357 Gene3D - 11 67 - -
Bisa06g1703 357 FunFam Myb transcription factor 69 116 - -
Bisa06g1703 357 SMART sant 66 114 IPR001005 -
Bisa06g1703 357 SMART sant 13 63 IPR001005 -
Bisa06g1703 357 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa06g1703 357 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa06g1703 357 PANTHER MYB DOMAIN PROTEIN 55 1 332 - -
Bisa06g1703 357 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa06g1703 357 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Bisa06g1703 357 CDD SANT 17 61 IPR001005 -
Bisa06g1703 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa06g1703 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa06g1703 357 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa06g1703 357 Gene3D - 69 116 - -
Bisa06g1703 357 CDD SANT 69 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1703 Bisa-ChrBisa06 57370317 57372111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1703 1 118 MYB Transcription Factor Family AT3G13890 94.915 6.19e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa06g1703 Myb_DNA-binding 1.3e-14 CL0123