Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1667 ATGCTCAACACAGGAATGAACATACTGTCTGGCATTACTGGGCAGAACAGCAAGAAAGGGAAGATAAAAGGGACAGTGGTGCTGATGAGCAAGAAGGCTCTGGACTTCAACCACTTACTCACTCTCCAAGCTCCAATCAACATCGGAGTTAATGCACTAAACACTGCTGTCGATACTGTTCATCAGTTCCTGGGTGGAGCTGTTACTCTTCAGTTGATCAGTGCTGTAAAAACTGACCCTGGAAATGGTTTGGGGAAAGTGGGAAAGGCCGCACCCTTGCAGCAAGATATTCCCTTTATTCCCAATATCACCACATTGGCGTCGTTGAGAGAGAAACAGGATAGATTAGGGGTTGAGTTCGAATACGAGGATGATTTCGGAGTGCCAGGAGCTATTGTCGTCAAGAACAACCTTCTTACTGAGTTCTTCCTCGTCAGTGTCACCCTCGATGACATCCCTAACCATGCCTCTCTCCACTTTGTCTGCAACTCCTGGATTTACCCTGACAACTACTATAAGCACTCTCGCATCTTCTTCGCCAACAAGTCATATCTGCCAAGTGAAACACCAGCAGCGTTATGGAAATACAGAGAACAAGAGCTGATAAGCTTAAGAGGAGATGGGTTTAGTGAGTGCAAGGAATGGGATAGAGTGTATGATTATGCAGTGTACAATGACTTGGGAAATCCTGAATCATCCATTGTAAATCTGGGTTCTCCAATGCCTCGCCCAACTCTTGGAGGCTCTTCTGAGCTTCCCAAACCTGCCGTCATCAAAGAAAATGTTTCGGGATGGATGACTGATGAAGAATTTGCAAGAGAGGTGCTTGCTGGTGTGAATCCTGGCTTAATTTATAGACTCCAAGAGTTCCCTCCAAAAAGCCAGCTGGATGCTAGTCTCTATGGTGATCAAACGAGCAAGATAACCAAAGAACATTTGGAGAAAAACATGAATGGACTAACAGTCAATGAGGCACTGAATAGCAACAGATTATTCATATTAGATCACCATGACGCCTTCATGCCATATTTGCGACGGATCAATAGCGAAACTGGCAATAAGGCTTATGCCACAAGGACCATCTTCTTCTTGCAGGACGACGGAACTTTGAAACCATTAGCCATTGAATTAAGCTTACCCCATCCTGATGGAGATCAGAGTGGTGCTGTAAGCAAAGTTTACTTGCCTGCAAAAGATGGCGTTGAGGGTACCATTTGGCTTCTCGCAAAAGCTTATGTCATCGTCAACGACTCTGGCTATCATCAACTCGTTAGCCACTGGCTGGAGACTCATGCAGTTATTGAGCCATTTGTGATTGCTACTAACAGACAGCTCAGTGCTCTCCATCCCATTCATAAGCTTCTTCATCCTCATTTTCGTGACACCATGAATATCAATGCACTTGCTCGACAAGCCTTGATCAATGCACAGGGCATTATAGAGTTATCATTCTTGCCTGGAAAATATTCCATGGAGATGTCTTCTAAGGTTTACAAGAACTGGGTTTTTCCAGAGCAAGCACTACCTGCTGATCTTGTCAAAAGAGGAATGGCAGTTGAGGATCCACAAGCTCCTCATGGTCTTCGTCTTATGATAGAAGACTACCCTTTTGCTGTTGATGGCTTAGAGATATGGGCAGCAATTAAGACATGGGTTCATGACTATGTCCACTGCTACTATGTGAACGATGACACTGTGAAACAAGACTCCGAACTACAAGCATGGTGGAAGGAACTCGTAGAAGTGGGTCATGGTGACCTAAAAGACAAGCCATGGTGGCCTAAGATGCAAACACGTAAAGAGCTTATTGAATCATGCACTATCGTCATATGGACTGCTTCAGCTCTTCATGCATCTGTCAACTTTGGACAATATCCTTATGGCGGTTATATTCTGAACCGTCCAACTTTAAGCAGAAGACTGATGCCTGAAGAAGGAACTCAAGAGTATAATGAGCTTAAGACGAACCCAGAAAAGGCGTTTTTGAGAACAATAACGCCAAAGATTGCGACCCTTATTGACCTTTCGGTTATAGAAATATTGTCAAGGCATACTTCTGATGAAGTCTATCTGGGGAAGAGAGACAATCCTCATTGGACAAGTGATGTGAAGCCATTGGAGGCTTTTAAGAAGTTTGGAAAGAAGTTGGAAGAGATCGAAGAAAAGCTTGTTAGGAGGAACAATGATGAGACCTTGAGAAATAGGGCTGGACCGGTTAATATGCCATATACTTTGCTCCATCCTAAGAGTGAGGAAGGACTGACTGGTAGAGGAATTCCAAATAAGTTTTCTATTTATGTGGTGAATTCGGACACCGGCAGAGGTTTTCCCATATTGTCGAAGTATCCAAGTGGAACTATGCCGTCTTTTTGGCAGATTGTGGGATTGAAATTTGGTCGCTCTACAATGGTTTTGGGCAATGGGATTTGTTGGGATCTAAGTAGGGTTGGCAAGGAGGACGATGTGAAACGGCAGGTGCTACAGAAGCTTCATGCCTGA 2499 0.4418 MLNTGMNILSGITGQNSKKGKIKGTVVLMSKKALDFNHLLTLQAPINIGVNALNTAVDTVHQFLGGAVTLQLISAVKTDPGNGLGKVGKAAPLQQDIPFIPNITTLASLREKQDRLGVEFEYEDDFGVPGAIVVKNNLLTEFFLVSVTLDDIPNHASLHFVCNSWIYPDNYYKHSRIFFANKSYLPSETPAALWKYREQELISLRGDGFSECKEWDRVYDYAVYNDLGNPESSIVNLGSPMPRPTLGGSSELPKPAVIKENVSGWMTDEEFAREVLAGVNPGLIYRLQEFPPKSQLDASLYGDQTSKITKEHLEKNMNGLTVNEALNSNRLFILDHHDAFMPYLRRINSETGNKAYATRTIFFLQDDGTLKPLAIELSLPHPDGDQSGAVSKVYLPAKDGVEGTIWLLAKAYVIVNDSGYHQLVSHWLETHAVIEPFVIATNRQLSALHPIHKLLHPHFRDTMNINALARQALINAQGIIELSFLPGKYSMEMSSKVYKNWVFPEQALPADLVKRGMAVEDPQAPHGLRLMIEDYPFAVDGLEIWAAIKTWVHDYVHCYYVNDDTVKQDSELQAWWKELVEVGHGDLKDKPWWPKMQTRKELIESCTIVIWTASALHASVNFGQYPYGGYILNRPTLSRRLMPEEGTQEYNELKTNPEKAFLRTITPKIATLIDLSVIEILSRHTSDEVYLGKRDNPHWTSDVKPLEAFKKFGKKLEEIEEKLVRRNNDETLRNRAGPVNMPYTLLHPKSEEGLTGRGIPNKFSIYVVNSDTGRGFPILSKYPSGTMPSFWQIVGLKFGRSTMVLGNGICWDLSRVGKEDDVKRQVLQKLHA 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1667 832 Gene3D - 418 763 - -
Bisa06g1667 832 ProSitePatterns Lipoxygenases iron-binding region signature 1. 421 435 IPR020833 GO:0016702|GO:0046872
Bisa06g1667 832 PRINTS Lipoxygenase signature 441 461 IPR013819 GO:0016702|GO:0046872
Bisa06g1667 832 PRINTS Lipoxygenase signature 421 438 IPR013819 GO:0016702|GO:0046872
Bisa06g1667 832 PRINTS Lipoxygenase signature 403 420 IPR013819 GO:0016702|GO:0046872
Bisa06g1667 832 CDD PLAT_LH2 21 181 IPR042057 -
Bisa06g1667 832 Pfam PLAT/LH2 domain 82 179 IPR001024 GO:0005515
Bisa06g1667 832 PRINTS Plant lipoxygenase signature 150 168 IPR001246 GO:0016491
Bisa06g1667 832 PRINTS Plant lipoxygenase signature 215 231 IPR001246 GO:0016491
Bisa06g1667 832 PRINTS Plant lipoxygenase signature 176 197 IPR001246 GO:0016491
Bisa06g1667 832 FunFam Lipoxygenase 264 398 - -
Bisa06g1667 832 FunFam Lipoxygenase 400 764 - -
Bisa06g1667 832 Gene3D PLAT/LH2 domain 12 184 - -
Bisa06g1667 832 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 21 184 IPR036392 GO:0005515
Bisa06g1667 832 Gene3D - 282 417 - -
Bisa06g1667 832 Pfam Lipoxygenase 193 255 IPR013819 GO:0016702|GO:0046872
Bisa06g1667 832 Pfam Lipoxygenase 252 748 IPR013819 GO:0016702|GO:0046872
Bisa06g1667 832 ProSiteProfiles PLAT domain profile. 44 180 IPR001024 GO:0005515
Bisa06g1667 832 SMART LH2_4 20 181 IPR001024 GO:0005515
Bisa06g1667 832 Gene3D - 185 280 - -
Bisa06g1667 832 PANTHER LIPOXYGENASE 252 765 IPR000907 GO:0016702|GO:0034440|GO:0046872
Bisa06g1667 832 ProSitePatterns Lipoxygenases iron-binding region signature 2. 448 458 IPR020834 GO:0016702|GO:0046872
Bisa06g1667 832 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 183 765 IPR013819 GO:0016702|GO:0046872
Bisa06g1667 832 SUPERFAMILY Lipoxigenase 185 765 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1667 Bisa-ChrBisa06 56261198 56270615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1667 253 765 Acyl Lipid Metabolism Gene Families AT3G22400 66.216 0.0 747