Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1661 ATGTCTAACTCATTGAGCGACTTGGTGCCTGATATCTTGGGGCAGAAGAAAGGGAAGATCAAGGGGACAGTGGTGTTGATGCCCAAGCAGGTTCTGGACTTCAACAACTTGAACCTCAATGCCGGCGTCAACCTGGGTCTCAATGCTCTTGGCTCTGTCTCTGATACTCTTCGCCAGTTGCTGGGTGGTGCTGTCTCTCTTCAGTTGATCAGTGCCGATAAGACTGACCCAGGAAATGGGTTGGGAAAACTTGGAAAGGAAGCATCGTTGGAGGGTATCGTACTCACAATGCCTTCGTTGTTTGAGGGCCAAAGTGCATTCAATGTTCAGTTCGATTACAGCGACGAGATCGGAGTGCCAGGAGCATTTGTGATAAGGAACAAGCTGTCCACAGAGTTCTTCCTTGTGAGCTTGACTCTCGATGACATTCCTAATCAGGGAACTCTCAACTTTGTTTGCAACTCCTGGGTTTATCCTGATGCCAAGTACAAAAGCAGTCGCATCTTCTTCTCCAACAAGACATATCTTCCAAGTAAAACACCAACAGCATTACTCAAATACAGAGAACAAGAGCTCATAACCCTAAGAGGAGATGGATTTGGAGAGCTAGAAGAATATGACAGAGTGTATGACTATGCAGTCTACAACGACTTGGGATGGCCAGATTTTAACAAGAGCCTTGTTCGTCCCACTCTTGGAGGCTCTTCCCAATATCCCTACCCTCGTAGAGGAAGAACCGGCAGACCACCCTCCAAATCAGGCCATCATCAACTTGTTAGTCATTGAGGAATGGCAGTGGAGGATCCAAATTCTACTCATGGTGTTCGTCTAGTGATAGAGGACTACCCTTTTGCTGTGGATGGCCTAGAGATATGGGATGCTATCAAGACATGGGTTAATGACTATGTTCAGTACTACTACGAGGACGATGACACTCTTAAGCAAGACCAAGAACTACAAGCATGGTGGAAAGAACTCGTAGAAGTTGGCCATGGCGACTTGAAAGACAAGCCGTGGTGGAATAAGATGCAGACTCGTCAAGAGCTCATTGAAACTTGCACCATAGTCATATGGACTTCTTCAGCTCTTCATGCAGCTGTCAACTTCGGACAGTTTCCTTATGGAGGTTACATCGTGAACCGTCCCACTTTGAGTCGAAGGTTGCTTCCCGAAGAAGGAACCCCAGAATACGAAGAGCTCAAGACCAACCCAGAGAAAGCTTTCTTGAAAACAATAACTCCCAAGTTTCAGACTCTTATTGATCTCTCGGTGATTGAGATATTGTCAAGGCATGCTTCTGATGAGGTATACCTCGGGACGAGAGACAACCCTAATTGGACTTCTGATGCGAAGCCATTGGAGGCTTTTAAGAGTTTTGGGAAGAAGTTGACGGAGATTGAGGAGAAGCTTGTGAAGAGGAACGACACTGAGACACTGAGAAACAGGGTTGGCCCAGTTAACATGCCTTACACTCTACTTTATCCTACGAGTGAGGAAGGACTCACGAACAGAGGAATTCCAAACAGTATCTCCATTTGA 1539 0.4633 MSNSLSDLVPDILGQKKGKIKGTVVLMPKQVLDFNNLNLNAGVNLGLNALGSVSDTLRQLLGGAVSLQLISADKTDPGNGLGKLGKEASLEGIVLTMPSLFEGQSAFNVQFDYSDEIGVPGAFVIRNKLSTEFFLVSLTLDDIPNQGTLNFVCNSWVYPDAKYKSSRIFFSNKTYLPSKTPTALLKYREQELITLRGDGFGELEEYDRVYDYAVYNDLGWPDFNKSLVRPTLGGSSQYPYPRRGRTGRPPSKSGHHQLVSHXGMAVEDPNSTHGVRLVIEDYPFAVDGLEIWDAIKTWVNDYVQYYYEDDDTLKQDQELQAWWKELVEVGHGDLKDKPWWNKMQTRQELIETCTIVIWTSSALHAAVNFGQFPYGGYIVNRPTLSRRLLPEEGTPEYEELKTNPEKAFLKTITPKFQTLIDLSVIEILSRHASDEVYLGTRDNPNWTSDAKPLEAFKSFGKKLTEIEEKLVKRNDTETLRNRVGPVNMPYTLLYPTSEEGLTNRGIPNSISI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1661 512 Pfam Lipoxygenase 184 254 IPR013819 GO:0016702|GO:0046872
Bisa06g1661 512 Pfam Lipoxygenase 262 495 IPR013819 GO:0016702|GO:0046872
Bisa06g1661 512 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 19 175 IPR036392 GO:0005515
Bisa06g1661 512 MobiDBLite consensus disorder prediction 234 265 - -
Bisa06g1661 512 Pfam PLAT/LH2 domain 70 170 IPR001024 GO:0005515
Bisa06g1661 512 SUPERFAMILY Lipoxigenase 262 512 IPR036226 -
Bisa06g1661 512 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 174 252 IPR013819 GO:0016702|GO:0046872
Bisa06g1661 512 PRINTS Plant lipoxygenase signature 167 188 IPR001246 GO:0016491
Bisa06g1661 512 PRINTS Plant lipoxygenase signature 239 258 IPR001246 GO:0016491
Bisa06g1661 512 PRINTS Plant lipoxygenase signature 141 159 IPR001246 GO:0016491
Bisa06g1661 512 PRINTS Plant lipoxygenase signature 206 222 IPR001246 GO:0016491
Bisa06g1661 512 PANTHER LIPOXYGENASE 263 512 IPR000907 GO:0016702|GO:0034440|GO:0046872
Bisa06g1661 512 SMART LH2_4 18 172 IPR001024 GO:0005515
Bisa06g1661 512 SUPERFAMILY Lipoxigenase 176 253 IPR036226 -
Bisa06g1661 512 CDD PLAT_LH2 19 172 IPR042057 -
Bisa06g1661 512 Gene3D PLAT/LH2 domain 21 192 - -
Bisa06g1661 512 Gene3D - 223 511 - -
Bisa06g1661 512 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 263 512 IPR013819 GO:0016702|GO:0046872
Bisa06g1661 512 ProSiteProfiles PLAT domain profile. 37 171 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1661 Bisa-ChrBisa06 56127623 56134593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1661 263 512 Acyl Lipid Metabolism Gene Families AT3G22400 62.353 4.91e-113 353