Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1635 ATGGAGCTCGTGGAAATGGAAACAGCATATCATCATCATCATGAAGATGACAAAATGAGAGTTCTGTACGAGGCATCATATAGAGGGTGTGTTTCAACTCTGAACTCTTTGATACAGCAAGACTCATTGATCTTGAACAAAATCAACTCTCAAACTGTCTTCATTGAAACCCCCTTACACATATCAGCTTCACTCGGCCACTTTGAATTCACAAAAGCCCTTCTTTATCACAAACCCAAACTCGCCCTTGAGTTGGACCCGTTTGGAAGCACAGCCCTCCACGTGGCTTCTGGAGAAGGACACGTGGACATTGTGAAGGAGTTATTGTCGGCTTATGACCAAGCATGCATGGTTCCTGATGCAGAAGGGAGGATTCCTTTGCACTATGGAGTTATAAGAGGGAGAGCAGAAGTTGTGAGAGAGTTGGTTAGAGCAAAACCAGGGTCTTTGAAGATCCTTCACAAAGGGAAAACTATGTTCCATTTGTGTGTGGAATTCAACCAATTGGAGGTACTGAAAGTTTTGATGGAATTGGATATCATTCTGTCCAGCGAGCTTCTCAATTTGAGGGACCTGGACGGTGGCAGCACCATTCTCCATCTAGCTGTCATGTTCAAGCAAGTTGAGAGCGAATTCCAAGGGACTTCCAAGAGCCTTGAAATACAAATCCTGTTGATGAAGAATGGCATCAATAGTGAAAAGAAAGAAATGGGCATTCCTCCACAAGCGGTGAGACCTCCAAAAGAAAAGATTTGGAGGAATATTTTAATGAATATGGGTAAGTGGTTTGAGCATAAGGGTGATTATTTAGAAGAGATGAGAGGGAACTTGAGTCTTGTGGCTACTGTTATCTCAACCATGACCTTTCAAGTTGCACTTAACCCTCCAGGCAGCTACATTCAACAATCTATATCTAATCACAACAACAACGCTACTGATCCCAGCTATAACAGCACTACTCAAATTTACAGGTATACTAACTCTGGCTATAATGGTTTTGGAGGATCCCTCGACTGCCTCGAGTTCACGGATGATAAGAATCAAACTAATCATGCATGTCCCGGAGAAGCCATGCTTGCTTCTCGTGTGCCCAAGGAATTTCTGACTTTCATGATTTTCAATACCATATCTTTCATTTCATCACTTGCTGTGACCCTCTTACTTGTAAGTGGCGTTCCTCTGAAGAATAAGATTGTGATGTGGATTTTATCCATAGGCATGTGTATCACTCTCTCATCCCTTGCATTCACTTACTTCTATGCCCTCTCCTTGATGACCCCAGACAGAATCTGGCCTTTAACCAAAATTTTGCTTGACATAGGCCACTCGACATGGTATGGATTGCTTGTACTTGTGGGTTTATACATCATAGTGCACTTTGTTATATGGGCAGCAAAGAAATGGATGAATATAACTAAGCATCGGATGTGA 1431 0.4242 MELVEMETAYHHHHEDDKMRVLYEASYRGCVSTLNSLIQQDSLILNKINSQTVFIETPLHISASLGHFEFTKALLYHKPKLALELDPFGSTALHVASGEGHVDIVKELLSAYDQACMVPDAEGRIPLHYGVIRGRAEVVRELVRAKPGSLKILHKGKTMFHLCVEFNQLEVLKVLMELDIILSSELLNLRDLDGGSTILHLAVMFKQVESEFQGTSKSLEIQILLMKNGINSEKKEMGIPPQAVRPPKEKIWRNILMNMGKWFEHKGDYLEEMRGNLSLVATVISTMTFQVALNPPGSYIQQSISNHNNNATDPSYNSTTQIYRYTNSGYNGFGGSLDCLEFTDDKNQTNHACPGEAMLASRVPKEFLTFMIFNTISFISSLAVTLLLVSGVPLKNKIVMWILSIGMCITLSSLAFTYFYALSLMTPDRIWPLTKILLDIGHSTWYGLLVLVGLYIIVHFVIWAAKKWMNITKHRM 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1635 476 SMART ANK_2a 155 184 IPR002110 GO:0005515
Bisa06g1635 476 SMART ANK_2a 17 47 IPR002110 GO:0005515
Bisa06g1635 476 SMART ANK_2a 122 152 IPR002110 GO:0005515
Bisa06g1635 476 SMART ANK_2a 88 116 IPR002110 GO:0005515
Bisa06g1635 476 SMART ANK_2a 54 83 IPR002110 GO:0005515
Bisa06g1635 476 SMART ANK_2a 194 234 IPR002110 GO:0005515
Bisa06g1635 476 Pfam Ankyrin repeats (3 copies) 23 110 IPR002110 GO:0005515
Bisa06g1635 476 Gene3D - 2 238 IPR036770 -
Bisa06g1635 476 Pfam Domain of unknown function 347 423 IPR026961 -
Bisa06g1635 476 Pfam Domain of unknown function 269 311 IPR026961 -
Bisa06g1635 476 ProSiteProfiles Ankyrin repeat region circular profile. 88 110 - -
Bisa06g1635 476 SUPERFAMILY Ankyrin repeat 12 231 IPR036770 -
Bisa06g1635 476 ProSiteProfiles Ankyrin repeat profile. 88 110 IPR002110 GO:0005515
Bisa06g1635 476 PANTHER HOMEOBOX PROTEIN WARIAI 28 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1635 Bisa-ChrBisa06 55389270 55391356 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1635 22 475 Miscellaneous Gene Families AT1G14480 24.359 5.43e-22 95.9