Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1625 ATGTCTTTGAGGATCCTTCACGAAGGGAAAACTGTGTTCCATTTGTGTGTGGAATACAACCACTTGGAGATCCTGAAAGCTTTGGTAGAATTATTGGATATCATTAACACTAGTGACCTTCTTGATTTCCAAGACTTGGATGGCGGGAACACCATTCTTCATTTGGCTGTCAAGTTCAAGCGAGTTGAGACTGTTAGGTACCTCCTGTCAATTTCTAAAATTAGAGAAGCATCAAACATGAGAAACAAGATGGGTTTCAGAGCGAGTGACATTGTAGTTCGGATTCCGAAGGACTTGAAAAGCCTTGAAATACAAGTCGTGTTTATAAACAGTGGCATCAAATTTGAAAAGAGAGAAATGGTGTTTATTGAAGAAGTTCCGGCGGAAGGGAAGCGGTGGGAAAAGATTTGGAAGACAATTAAAGGCTGGCTTGAGTATAAGGGTGATTATTTAGAAGAGATGAGAGGGAATTTGAGTCTTGTGTCCACTGTGATCGCAACCATGACCTTTCAAGCTGCACTTAACCCTCCAGGAAGCTACGTTCAACAAGGCATATCTAATAACGACAACAACATGACTGCTCCCCAATATGGCATCACCGATTTGATTGACGACCCCAGTGAGATTGAGTATCGCTCTCGTCGCTTGTATAACTTTACTAACCGTCTGGATGATGATGGAAGACCCCTCAGCTGCTTTCTGTTTCTGGATGATGGTGATGATATTCAAAGTGCATGTCCCGGGAAAGCCCTTCTTGCTTCTCTTTATCCAGATGATTTTCTCAAGTTCGTGATCTTCAATACCATATCCTTCATGTCATCACTTGCTGTGACGCTCTTGCTTGTGAGTGGGGTTCCTCTGAAGCATACGTCTGTGATGTTGATGTTATCCCTCGGCATGTGTGCCGCTCTTTATTCCCTAGCAATGGCCTACATCTATGGCTTCCTCATGATGGCCCCGGACAGTATTTGGAAAAAATCCAACCATATCTTTGTGCAGGCCTCCACGAGTCTGGTTGAATTGCTTGGGCTTGTGGGTGCATACATCGCAGTCAAATTTGTTGCATGGGGAGTGAGGAAATGCCACGAAATTAAGTGTCGGATGTCACTGTCTCGGAGGAACAGAGGTTTTCTTAGTCAATAA 1143 0.4374 MSLRILHEGKTVFHLCVEYNHLEILKALVELLDIINTSDLLDFQDLDGGNTILHLAVKFKRVETVRYLLSISKIREASNMRNKMGFRASDIVVRIPKDLKSLEIQVVFINSGIKFEKREMVFIEEVPAEGKRWEKIWKTIKGWLEYKGDYLEEMRGNLSLVSTVIATMTFQAALNPPGSYVQQGISNNDNNMTAPQYGITDLIDDPSEIEYRSRRLYNFTNRLDDDGRPLSCFLFLDDGDDIQSACPGKALLASLYPDDFLKFVIFNTISFMSSLAVTLLLVSGVPLKHTSVMLMLSLGMCAALYSLAMAYIYGFLMMAPDSIWKKSNHIFVQASTSLVELLGLVGAYIAVKFVAWGVRKCHEIKCRMSLSRRNRGFLSQ 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1625 380 PANTHER CASKIN 7 331 - -
Bisa06g1625 380 Pfam Domain of unknown function 246 316 IPR026961 -
Bisa06g1625 380 Pfam Domain of unknown function 150 185 IPR026961 -
Bisa06g1625 380 Pfam Ankyrin repeats (3 copies) 8 70 IPR002110 GO:0005515
Bisa06g1625 380 Gene3D - 3 96 IPR036770 -
Bisa06g1625 380 SUPERFAMILY Ankyrin repeat 8 94 IPR036770 -
Bisa06g1625 380 SMART ANK_2a 48 77 IPR002110 GO:0005515
Bisa06g1625 380 SMART ANK_2a 8 37 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1625 Bisa-ChrBisa06 54877657 54879693 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1625 8 184 Miscellaneous Gene Families AT2G01680 23.077 4.16e-06 47.0