Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1615 ATGTTAGTTTGTGATTTTTCACCTGCTAGGTTAATTGAAACCAATGATGTTGTCTTTGAGTACAGGCCAAATTGTGGATGTGGTCCAGGTTGTGTTAATCGAACTTCTCAAAGAGGACTGAGATATCTTCTGGAGAGGCGAATGCTAAATGAAGCATCTACAACAATCAATCTTTTGGACAAATCTGAGGATGACAATTTTGAGAGTGTCCCAATGTTCTGTATTGATGCAAGATCAACTGGAAATATTGCTCGATTTATAAACCATAGTTGTGAGCCAAATTTATTTGTTCAGTTATGTTAG 303 0.3663 MLVCDFSPARLIETNDVVFEYRPNCGCGPGCVNRTSQRGLRYLLERRMLNEASTTINLLDKSEDDNFESVPMFCIDARSTGNIARFINHSCEPNLFVQLC 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1615 100 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H 52 98 - -
Bisa06g1615 100 ProSiteProfiles SET domain profile. 28 100 IPR001214 GO:0005515
Bisa06g1615 100 SUPERFAMILY SET domain 10 99 IPR046341 -
Bisa06g1615 100 Pfam SET domain 60 98 IPR001214 GO:0005515
Bisa06g1615 100 Gene3D SET domain 2 47 IPR046341 -
Bisa06g1615 100 Gene3D SET domain 48 100 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1615 Bisa-ChrBisa06 54591361 54592045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1615 5 98 EF-hand Containing Proteins AT5G13960 35.484 3.05e-19 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa06g1615 SET 2.3e-07 No_clan