Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1605 ATGGAGAAGAAGGCTAAAGGCAAAGAGATCACCGTCATCAACAAAGTGTCTTGGTCCAAACAAGAAGATCAAACCCTCTTCAATTATGTCACCTCCCATGGCGAAGGCAAATGGCAGAAAATTGCTCAAAAGGCAGGAATAAAGAGAGGGGATATAACTCCAGACGAGGAAGATATGATCATCAGACTTCATCGTCTTCTCGGTAACAGGTGGGCTTTGATAGCTAAGAGATTACCGGGACGAACCGACAATGAAATAAAAAACTACTGGAACATCAGTCTTTCCAAAAAATTACAGAGACAAAGACAACCAACATCAACATCGTTGTCACCATCTTCCCTGAATCCTCTACCTGGCTTGGCAGCATGTTGGGTAAAAGAGGATGGTCCGATCCACGAGATGCCTGATCAGTTTGTCCATAGCCGAGCAGGACAATATTGGTCAAAAGAGGATTCGCAGACGTCCCCATCTCCATTTACAAAGGATCAAAACTTCAGAAAAACAAAACATGTGATCAACGTTGTGACACCACAAGCTTCACAGCCGACAAGAAGAGCTAATGAGGCTATCAGAACTTATAGTGACAATAACACCAGAGGCCCTGGTTCCTCCAATCAAATGCATTATGGTCCCTTAAACAATGATGCTAATTTTCCGATTAGCGACTTCCTCACCAATGATGATGATGATGATGAAGAATTTGACGACCAGAACCAATTTCTCATGCCAGAAAATTTGAGATCTCATGGTAAAGAAGAAGATCAGAACAATGTGTTACCAGAGAAATTAAGTGACCCTATGGACAACGTTTTGGACATGGAGCTTAAAAGGGTAGCCTATTTTCTTGGGTTAGAAGATGAATGTACTTTGGAATGA 876 0.4201 MEKKAKGKEITVINKVSWSKQEDQTLFNYVTSHGEGKWQKIAQKAGIKRGDITPDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNISLSKKLQRQRQPTSTSLSPSSLNPLPGLAACWVKEDGPIHEMPDQFVHSRAGQYWSKEDSQTSPSPFTKDQNFRKTKHVINVVTPQASQPTRRANEAIRTYSDNNTRGPGSSNQMHYGPLNNDANFPISDFLTNDDDDDEEFDDQNQFLMPENLRSHGKEEDQNNVLPEKLSDPMDNVLDMELKRVAYFLGLEDECTLE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1605 291 CDD SANT 53 91 IPR001005 -
Bisa06g1605 291 Pfam Myb-like DNA-binding domain 49 91 IPR001005 -
Bisa06g1605 291 Pfam Myb-like DNA-binding domain 15 48 IPR001005 -
Bisa06g1605 291 SUPERFAMILY Homeodomain-like 14 90 IPR009057 -
Bisa06g1605 291 SMART sant 14 46 IPR001005 -
Bisa06g1605 291 SMART sant 48 96 IPR001005 -
Bisa06g1605 291 MobiDBLite consensus disorder prediction 169 212 - -
Bisa06g1605 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 43 IPR017930 -
Bisa06g1605 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 98 IPR017930 -
Bisa06g1605 291 MobiDBLite consensus disorder prediction 146 162 - -
Bisa06g1605 291 ProSiteProfiles Myb-like domain profile. 14 43 IPR001005 -
Bisa06g1605 291 MobiDBLite consensus disorder prediction 146 213 - -
Bisa06g1605 291 Gene3D - 53 114 - -
Bisa06g1605 291 Gene3D - 13 52 - -
Bisa06g1605 291 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 13 221 - -
Bisa06g1605 291 ProSiteProfiles Myb-like domain profile. 44 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1605 Bisa-ChrBisa06 54506529 54508076 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1605 18 121 MYB Transcription Factor Family AT5G40330 46.341 6.39e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa06g1605 Myb_DNA-binding 1.5e-13 CL0123