Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1600 ATGGCTTGTGAGAGTGGTGATTGTATGAAGAGCAAAGTGAAGCCAACTGAAGCCATGACTCTGAACAAAGGAGCTTGGACACCAGAAGAAGATAGGAAACTTGCTGAGGTTATTGCAGCTCATGGGGCTAAAAAATGGAAGTCCATCGCACTCAAAGCAGGACTGAGTCGGTGTGGTAAGAGTTGCAGGCTAAGATGGTTGAACTATCTCAGACCCAACATCAAGAGAGGAAACATATCAGACCAAGAAGAGGATTTGATTGTTCGCCTTCATAAACTCCTTGGAAACAGGTGGTCTTTGATTGCGGGAAGACTGCCAGGGCGAACAGACAATGAAATAAAAAACTATTGGAATTCTCATTTGAGCAAGAAGATAAAGCAAAGGGATAAGAAGCATTCAAGTGGGAGTTCTTCTACAAGAGAAGAGACACCAAGGGTAGTGGTAGAGGAGATTAAACCTAGCACACCTGAAGAGAATATCACCGTCACAATAAGAGAAGAGAATAATTCTACAGAAGAAGCCAATCAACAAGACTCATCTTCAAAACACATAATTAATTTTGACGTTGATGGGTTCTTTGATTTCTCAGAAGCAGAAGAAGGTCCATTGAATCTGGAGTGGGTTAGCCAGTTCCTTGAACTAGACCATGATGCTACTCTTGGACTCTTCTCACAATAA 678 0.4204 MACESGDCMKSKVKPTEAMTLNKGAWTPEEDRKLAEVIAAHGAKKWKSIALKAGLSRCGKSCRLRWLNYLRPNIKRGNISDQEEDLIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQRDKKHSSGSSSTREETPRVVVEEIKPSTPEENITVTIREENNSTEEANQQDSSSKHIINFDVDGFFDFSEAEEGPLNLEWVSQFLELDHDATLGLFSQ 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1600 225 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 17 179 - -
Bisa06g1600 225 Pfam Myb-like DNA-binding domain 76 121 IPR001005 -
Bisa06g1600 225 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Bisa06g1600 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 74 IPR017930 -
Bisa06g1600 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Bisa06g1600 225 FunFam MYB-related transcription factor 22 75 - -
Bisa06g1600 225 MobiDBLite consensus disorder prediction 131 146 - -
Bisa06g1600 225 Gene3D - 80 147 - -
Bisa06g1600 225 Gene3D - 23 75 - -
Bisa06g1600 225 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Bisa06g1600 225 CDD SANT 80 121 IPR001005 -
Bisa06g1600 225 SMART sant 22 72 IPR001005 -
Bisa06g1600 225 SMART sant 75 123 IPR001005 -
Bisa06g1600 225 FunFam Transcription factor TT2 79 148 - -
Bisa06g1600 225 MobiDBLite consensus disorder prediction 124 146 - -
Bisa06g1600 225 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Bisa06g1600 225 SUPERFAMILY Homeodomain-like 21 117 IPR009057 -
Bisa06g1600 225 CDD SANT 25 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1600 Bisa-ChrBisa06 54383373 54385002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1600 23 158 MYB Transcription Factor Family AT5G40330 56.618 1.11e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa06g1600 Myb_DNA-binding 1.8e-18 CL0123