Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1599 ATGAGCAATTGGATGGGGTTTTCTCTGACTCCACACTTGAGGATTGATGAAGTATACGGGAATGGGAGAGAAAACCAAGAAGACCACCGTATGGGCTTTCTTTCTCATCCTCATCGCTTGTCTGTTATGCCTTTAAGATCAGATGGCTCTCTCTGCGTTGCTGACCCCTTTAGGCACTCTGGTGCAGCTGAAGAATGGAGATATGATAATGGAGTAGCAGGAGGAAACTCAAACGAAGATGGCCCAAAGCTTGAAGATTTCCTCGGATGCTACTCAAACTCTTCTGATATTGCCGAAACCAAAGTCTATTGCCAAGGCAGTGCTCAACATCACCAAGACCAAAACCAAAACCAGAACCAGAACAACGTCTCCAGCCGAATTAATGTGAATGTGGCCCCAAGCTTCAACACCAACACTGAGATAGAAAATCATGGGGAAAGTCTTCCAAACCCAACTTCTATAATACAATCTATTCATGCATACAACGATGATAACCCACGAGGTATAATCCCCAGTAATGGCATCTACAAGTCCTGGTTGGCTCAAACCCAGTTTTCTGATGGAAAATCTTCTGCTGAAGCTAATGGGTATAACTATCAATCTCTGTCTCTAACTATGTGCCCAAGTGTACAAAACGGTGTGTGTGGTGCAATTCCCCCTGTTCAAGTGGATGACGATAATCGTAAGAGGTCAATGGCGAAATCTCTTGCTGTTAGAGAACCTGTGCCTCGCAAATCTATTGATACTTTTGGTCAAAGAACATCCCAATACAGAGGCGTCACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGGAAGGAAGGACAGACAAGGAAAGGAAGGCAAGGTGGTTATGACAAGGAAGAAAAAGCAGCAAGGGCTTATGACTTAGCCGCACTCAAGTATTGGGGTCCAACCACTCACATAAATTTCCCTTTAAGCACTTACGAGAAGGAACTTGAAGAGATGAAACATATGACTAGGCAAGAATTTGTCGCCAATTTGAGAAGGAAGAGCAGTGGATTTTCAAGAGGTGCATCAGTGTATCGGGGTGTGACAAGACACCATCAACATGGAAGGTGGCAAGCTAGGATTGGTAGAGTTGCAGGAAACAAAGACTTGTATCTTGGTACATTTAGCACGCAAGAGGAAGCTGCAGAAGCATATGATATAGCAGCAATAAAGTTCAGGGGCACAAGTGCTGTAACAAACTTCGATATAAGCAGGTACGACGTGAAGAGGATATGCTCGAGCTCCACCCTCATCGCAGGGGATCTTGCAAAGAGGTCCCCAAAAGACCCATCTTCTGTCGTCGCCGCCACAAGTGACGACTTCAACACTGTTTCGTCAACCTCACTGACGACATCGTCTCATCACCAACAGCCACAGCATTCTGATGAGTTGGCCAACATGGTGTGGAATGACAACAGTGAAAACACCAACGAGAAGCAGGTCACTGATCACACTTGTGAGAATACCAAGAATGTGAAGAATGGTTCGAATTCGGAAGAAAGCGGTAACGAGTTTGGTGTGAGTGGTGCAGAGTTTGGAAATGGGTTCTTCACGCTGCAGGCACCGAAGTATAATGATGAAGATGGGAACAACGAGAATGATGATGATAACTTGAATAATGCGAGTCGCATTGGGAATCTGGGTCTGGTTCATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA 1719 0.4503 MSNWMGFSLTPHLRIDEVYGNGRENQEDHRMGFLSHPHRLSVMPLRSDGSLCVADPFRHSGAAEEWRYDNGVAGGNSNEDGPKLEDFLGCYSNSSDIAETKVYCQGSAQHHQDQNQNQNQNNVSSRINVNVAPSFNTNTEIENHGESLPNPTSIIQSIHAYNDDNPRGIIPSNGIYKSWLAQTQFSDGKSSAEANGYNYQSLSLTMCPSVQNGVCGAIPPVQVDDDNRKRSMAKSLAVREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKRSPKDPSSVVAATSDDFNTVSSTSLTTSSHHQQPQHSDELANMVWNDNSENTNEKQVTDHTCENTKNVKNGSNSEESGNEFGVSGAEFGNGFFTLQAPKYNDEDGNNENDDDNLNNASRIGNLGLVHQVPMFALWNE 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1599 572 Gene3D AP2/ERF domain 255 321 IPR036955 GO:0003700|GO:0006355
Bisa06g1599 572 Gene3D AP2/ERF domain 355 415 IPR036955 GO:0003700|GO:0006355
Bisa06g1599 572 ProSiteProfiles AP2/ERF domain profile. 256 319 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 Pfam AP2 domain 256 311 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 Pfam AP2 domain 354 405 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 FunFam AP2-like ethylene-responsive transcription factor ANT 255 321 - -
Bisa06g1599 572 MobiDBLite consensus disorder prediction 487 550 - -
Bisa06g1599 572 FunFam AP2-like ethylene-responsive transcription factor 354 415 - -
Bisa06g1599 572 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 79 494 - -
Bisa06g1599 572 SMART rav1_2 355 419 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 SMART rav1_2 256 325 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 SUPERFAMILY DNA-binding domain 354 415 IPR016177 GO:0003677
Bisa06g1599 572 MobiDBLite consensus disorder prediction 498 515 - -
Bisa06g1599 572 CDD AP2 354 415 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 SUPERFAMILY DNA-binding domain 255 321 IPR016177 GO:0003677
Bisa06g1599 572 PRINTS Ethylene responsive element binding protein signature 257 268 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 PRINTS Ethylene responsive element binding protein signature 395 415 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 CDD AP2 255 321 IPR001471 GO:0003700|GO:0006355
Bisa06g1599 572 ProSiteProfiles AP2/ERF domain profile. 355 413 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1599 Bisa-ChrBisa06 54339817 54343257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1599 1 438 AP2-EREBP Transcription Factor Family AT1G72570 51.592 2.48e-138 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa06g1599 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1599 06 54339817 54343257 Bisa06g1599 06 54339817 54343257 ECH