Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1582 ATGCCCTCCAAAAGGCCTCCATTCAAAACCTTTCTTCTTGGCTGCTTCAAGGCCAACAATTACAAGTGTCACCAATCCTCAGACCCAACCATAGTCTCCAAACACACACCTTCTTCCAGGAGACTGTCCCTCTCTGATCTCAGCAATGCTTCATCACTCTCCTTCGTGAGTGATCTCTCCAACTCTCTTCTTGGATCAAATCTCCAAATCTTCACCTGCAGGGAGCTCAGAGACATCACTAATAACTTCAGCAGAAGCAGTGTTCTTGGGGAAGGTGGGTTTGGGAAGGTGTATAAAGGCTTCATTGATGACAAGCTTAGGCCTGGATTGAAACCTCAAGTTGTTGCAGTTAAGGTCTTGGACTTGGATGGCAAACAGGGCCACAGAGAGTGGTTGGCTGAAGTGATAATTCTGGGGCAGTTGAAGCATCCCCATCTGGTGAACCTAATTGGGTATTGCTGTGAAGATGAGCACAGGCTTCTGGTGTATCAGTACATGGAGAGGGGAAATCTAGAAGAAAAGCTTTTCAAAGGCTATTTAGCAGCCTTGCCATGGTTAACAAGAATCAAAATAGCAATTGGAGCTGCAAAGGGTCTTGCTTTCCTTCATGAAGAAGAGAAACCAGTCATATATAGGGATGTTAAAGCCTCAAACATACTGTTAGACGCTGATTACAATGCCAAACTCTCTGATTTTGGATTAGCAATAGACGGTCCAGATGAAGATCAAACTCACATCACAACTCGAGTTATGGGTACACATGGTTATGCTGCTCCAGAGTACATCATGACAGGGCATTTAACAACCATGAGCGATGTATACAGCTTTGGGGTGGTTTTGTTGGAGCTACTTACAGGGAAGAGATCTGTGGACAATAATCGACCTCCGAGAGAGCAGGATTTGGTGGAGTGGGCGAAACCACTCCTGAAAGACACCCACAAGCTCGAGAGAATAATGGACCCAAGGCTGGAGGGTCAGTACTCCATTGAAGGGGCTCGAAAGGTGGCTGCTTTGGTTCACCAATGTGTCAGCCATCAGGCTAAGGCTCGACCCACAATGCGCACCGTGGTCAAGTCCTTAGAGCCCATCATGCACCTCACCGATATCCCGCTTGGCCATTTCGTCTATGTCGCTTCCAATGAGGAAGGGAATGGAGTTTCAGTACAGAGGAAAGAGAATGAAGAAGAGAAGGCAGAGAAAAGGGAGGAGGAGGAGAAGGAACGACAGAGGAAACGAAAAATTCGTAGGCGTAAACGACGGGTTAAGCCACTGAGAACTCGTGCCGTTTACTCCGATACGACACTGTACAAAACTCTAGGTACTAGCTTGTACACTTCCAAGCAAACGCCTGAAGGAACGGATGGAGATAATAATACTATAATAGCATTATATTAA 1395 0.4631 MPSKRPPFKTFLLGCFKANNYKCHQSSDPTIVSKHTPSSRRLSLSDLSNASSLSFVSDLSNSLLGSNLQIFTCRELRDITNNFSRSSVLGEGGFGKVYKGFIDDKLRPGLKPQVVAVKVLDLDGKQGHREWLAEVIILGQLKHPHLVNLIGYCCEDEHRLLVYQYMERGNLEEKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPDEDQTHITTRVMGTHGYAAPEYIMTGHLTTMSDVYSFGVVLLELLTGKRSVDNNRPPREQDLVEWAKPLLKDTHKLERIMDPRLEGQYSIEGARKVAALVHQCVSHQAKARPTMRTVVKSLEPIMHLTDIPLGHFVYVASNEEGNGVSVQRKENEEEKAEKREEEEKERQRKRKIRRRKRRVKPLRTRAVYSDTTLYKTLGTSLYTSKQTPEGTDGDNNTIIALY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1582 464 ProSitePatterns Protein kinases ATP-binding region signature. 89 118 IPR017441 GO:0005524
Bisa06g1582 464 Gene3D Transferase(Phosphotransferase) domain 1 166 369 - -
Bisa06g1582 464 MobiDBLite consensus disorder prediction 387 405 - -
Bisa06g1582 464 ProSiteProfiles Protein kinase domain profile. 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1582 464 SUPERFAMILY Protein kinase-like (PK-like) 59 362 IPR011009 -
Bisa06g1582 464 Coils Coil 386 417 - -
Bisa06g1582 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Bisa06g1582 464 SMART serkin_6 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1582 464 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 166 369 - -
Bisa06g1582 464 MobiDBLite consensus disorder prediction 384 405 - -
Bisa06g1582 464 Gene3D Phosphorylase Kinase; domain 1 56 165 - -
Bisa06g1582 464 Pfam Protein tyrosine and serine/threonine kinase 86 360 IPR001245 GO:0004672|GO:0006468
Bisa06g1582 464 FunFam Serine/threonine-protein kinase BIK1 50 165 - -
Bisa06g1582 464 Coils Coil 461 464 - -
Bisa06g1582 464 CDD STKc_IRAK 89 363 - -
Bisa06g1582 464 PANTHER OS01G0588500 PROTEIN-RELATED 44 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1582 Bisa-ChrBisa06 53993085 53995205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1582 69 360 Glycoside Hydrolase AT3G07070 51.864 1.42e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa06g1582 PK_Tyr_Ser-Thr 5.4e-48 CL0016