Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1562 ATGGCGGTTGCTCCGGCGAATCTCGGGCTAGCTCTCCTGTTCTCCGCCTTCATTGCCGCTCTCCGATTGGCGTCTGCAATGTCAGAGGCCGAAGCCTTGATTAATTTCAAAGCCGCATTTTCCAATCCTCAAGCTTTGAAAACCTGGGTGCCGAACTCTGTTCCCTGCAAGGATGGGGCAGAATGGGAAGGGGTTATCTGCAACAGAGGCGGTTACGTCTCTGGGATTCGGTTAGAAGGAATGGGGTTATCGGGGAAGATCGATGTGAATCCGTTGCTAGAAATCAAAGGTCTGCGAACTTTCAGCGTTATCAACAATTCTTTCGCTGGTTCAATGCCCGAAATAAATCGGATAGGTTTCTTGAAAGCTTTGTACTTGTCGGCGAATCAATTTTCTGGCGAGATTCCGTCGGATTTCTTCCAGAAAATGAGGTCTCTGAAGAAACTATGGCTCTCCTATAACAATTTCTCGGGTGAGATTCCGTCGCAGATTCCTCAACTCGTCGAGCTTCATCTCGAGAACAATCAGTTCACTGGGAACATAGCGAATCTGAGCAGAACGTCATCATTGGTGCAATTCAACGTGTCCAACAACAAATTGGAGGGAGAAATCCCACCGAGCTTATCGAAATTCAGCGAGAGCTCATTTTCTGGGAATTCTGGCCTCTGCGGTGAGCAATTGGGGAAACCGTGTGAAAAAGTAGTTGAACCGCCAAACCCCATAGAAAATACAGCACAAAACAACAATAACGGCGGTGCGTCTGGTTCAAATTCAAATCTTAGTACAAATTTAAATTCAAATTCAAAGTCTAGCAGTAACAGTAGTAGTAGCACAGTGAATGTTGCTGTAATGGCTGTAGCAGCTACCGTAGTGGTTCTCATGATTATTGTTATACTTTTTGTTAAATCAAGGAAAAAGAAGAAGGAAGAGGAAATATTGGGTTCAGTCAGATCAGAGAGAAATAACGAAGAAGCAGCAGTAGAAGTTCAAGTTGCTGCATCTGCGAAGAAAGAAGATGGCGGTGTTACCCCTTTATCCAGAAAATCAAGTCATACGGGTTCAAGCAAAAGAGGGACAGGTAAGGGCGGCGTCGGCGAGCTGGTGGTGGTGAATGAAGAGAAGGGTGTGTTTGGGATGCTGGATTTGATGAAGGCAGCTGCAGAAGTTCTGGGAAATGGAGGGTTTGGATCTTCCTATAAGGCTACGATGGCTAATGGAGTGGCGTTGGTGGTGAAGAGGATGAGGGAGATGAATGTGCTGGCAAGAGATGGGTTTGATGCAGAGATGAGGAGGCTTGGGAGTTTGAGACACAGGAATATCTTGACCCCTCTGGCTTATCTTTATAGGAAGGATGAGAAGTTGGTGGTGTTTGAGTATGTTCCTAGAGGCAGTTTGCTGTATTTGTTGCATGGTGATCGTGGACCATCACATGCTGAACTGGATTGGCCTGCCCGTTTAAAGATTGTACAAGGTATAGCTGAAGGAATGCTTTATCTTCATATACAGCTTGCTTCCTCTGTTTTACCCCATGGTAACCTCAAGTCCAGCAATATCCTTCTTGGTTCTGATCAAGAGCCAAAGCTTTCAGATTATGGGTTTAGCCCCTTGATCAACTCTGCCAATCTAACACAAGCTCAGTTTGCTTATAAGACTCCTGAAGCATCACAACAAGGGCATATTTCTCCCAAATCTGACGTTTATTGTCTCGGTGTCGTCATTCTTGAAATCCTCTCTGGAAAATTCCCCTCCCAGTATCTCAACAATGGCAGCGGTGGAATTGATGTAGTTCAATGGGCTTACTCAGCAATTTCTGAAGGAACGGTAATAGAGATGCTTGATCCTCAACTTACAAGCTCTGAACATTCACATGGTGAGATGGAGAGACTCCTCCATATTGGTGTTGCTTGCACTACAAGTAACCCCATGCAGCGGTTGGACATGTCTGAAGCGTATAGAAGGATAAAAGAGATACAAACAGAAGGTGGCTCACCAGCTCAGGATGACCAATCTCAGAGAAGCTTTGGATCCTGCAGCACGGGAAGCAGATTGGGGCACCAAGACAATGACAGTTCTGATTCTGGCATTTCCTAA 2091 0.4558 MAVAPANLGLALLFSAFIAALRLASAMSEAEALINFKAAFSNPQALKTWVPNSVPCKDGAEWEGVICNRGGYVSGIRLEGMGLSGKIDVNPLLEIKGLRTFSVINNSFAGSMPEINRIGFLKALYLSANQFSGEIPSDFFQKMRSLKKLWLSYNNFSGEIPSQIPQLVELHLENNQFTGNIANLSRTSSLVQFNVSNNKLEGEIPPSLSKFSESSFSGNSGLCGEQLGKPCEKVVEPPNPIENTAQNNNNGGASGSNSNLSTNLNSNSKSSSNSSSSTVNVAVMAVAATVVVLMIIVILFVKSRKKKKEEEILGSVRSERNNEEAAVEVQVAASAKKEDGGVTPLSRKSSHTGSSKRGTGKGGVGELVVVNEEKGVFGMLDLMKAAAEVLGNGGFGSSYKATMANGVALVVKRMREMNVLARDGFDAEMRRLGSLRHRNILTPLAYLYRKDEKLVVFEYVPRGSLLYLLHGDRGPSHAELDWPARLKIVQGIAEGMLYLHIQLASSVLPHGNLKSSNILLGSDQEPKLSDYGFSPLINSANLTQAQFAYKTPEASQQGHISPKSDVYCLGVVILEILSGKFPSQYLNNGSGGIDVVQWAYSAISEGTVIEMLDPQLTSSEHSHGEMERLLHIGVACTTSNPMQRLDMSEAYRRIKEIQTEGGSPAQDDQSQRSFGSCSTGSRLGHQDNDSSDSGIS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1562 696 Gene3D Ribonuclease Inhibitor 22 116 IPR032675 -
Bisa06g1562 696 Gene3D Transferase(Phosphotransferase) domain 1 460 678 - -
Bisa06g1562 696 MobiDBLite consensus disorder prediction 233 276 - -
Bisa06g1562 696 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 659 IPR046959 -
Bisa06g1562 696 ProSiteProfiles Protein kinase domain profile. 384 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa06g1562 696 Gene3D Ribonuclease Inhibitor 117 233 IPR032675 -
Bisa06g1562 696 MobiDBLite consensus disorder prediction 656 696 - -
Bisa06g1562 696 MobiDBLite consensus disorder prediction 662 696 - -
Bisa06g1562 696 SUPERFAMILY Protein kinase-like (PK-like) 388 653 IPR011009 -
Bisa06g1562 696 SUPERFAMILY L domain-like 27 211 - -
Bisa06g1562 696 Pfam Protein tyrosine and serine/threonine kinase 388 651 IPR001245 GO:0004672|GO:0006468
Bisa06g1562 696 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Bisa06g1562 696 MobiDBLite consensus disorder prediction 240 276 - -
Bisa06g1562 696 Gene3D Phosphorylase Kinase; domain 1 376 459 - -
Bisa06g1562 696 MobiDBLite consensus disorder prediction 314 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1562 Bisa-ChrBisa06 53255363 53258150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1562 8 657 Receptor kinase-like Gene Family AT3G42880 43.178 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa06g1562 Pkinase 3.2e-29 CL0016