Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1547 ATGGCCGATTCTTCCTTTGAAATTGATTACTACTCCTCAGGCCATTACCCCCCAGGAGGCAACCCACCAACTCCAGTGAGCTCTCGCAACACGTCTAGGTCTTTCGCGGCTGCGTCGAGCTCCCGGAGCAACCTCAACTCTCGGCGAGGCCGCCGGAGCAGAGCTACGGCGGCCTCCGGCGACGACCATTCATGGCAGACGGAGGTCTCGTGGCAGTTTGAGCCCACTGGGTGGCGCGAGTACAGTAACAGAAACTTGGGCTCTGTTTTAAGTCCATGGGCTGCAAGCCCGAGCCCATCTGATCGGAGTCGGGTTTTTATCCGGTCGGCCAAGGATTATTACCTTTCTAGAACGAGCGGGTTCTTCAGAGGAAGCGGCTTCGCGAAGAACTCGTACTCTGAGAATTCAGGCTATGCCGTTCCGTCTGGGAGAGTCGAGCTTCAGAGCTATGTCGCTCAAGAGAATGACGATCAGAGGAGCAAGTCGTATAATGGGTTTTCGAACCTGGAGATCATCAAGGAAGGGATTGTTGGTAGAAAGAAGAATAGTCCGTTGGCGGCAGAAGATGAGTTGAGTTTCACGTCTTTCAGTATTGGCCATGATCGTGAACTATCACATGTGAAACATGATAATTATGGTGATTATGATGGGCATTATGTTGCTGATCACGGACCGGTAGTACCATCACATGGAATTGGAAGCCATGGTGGTGGTGGGGAATATAGTCATTATGGGATTGACAAGTTTTCTGGGTTTGATGGAGATGGTGGTGAGGAAATGGATGATGGTGATGTGGAGCCTGCAAAGTCAGTTGGGTTGTTAAGCTTGTTTAGGTACTCAACAATGTGGGATATAGTACTTGTGATTTTGGGTTGTTTTGGGGCTCTCATAAATGGGGGATCACTTCCATGGTATTCTTATCTTTTTGGAAAAGTAGTCACTAAGATTGCCACAGAATCAAAAGATGGTGGTGACAAATCCCAGATGATAAAGGATGTAGAGAAGATATGCATATTTATGACTGGATTAGCTGCAGTAGTGATGGTTGGAGCATATTTGGAGATCACATGTTGGAGGTTGGTAGGGGAGCGATCTGCTCAAAGAATAAGAAGTGAGTATTTAAGTGCAGTTCTTCGTCAGGACATTAGCTTTTTTGATACAGAGATCAGTACTGCTGATATTATGCATGGTATTGCAAGCGATGTTGCACAAATTCAAGAAGTTATGGCAGAGAAGATGGCTCACTTCGTCCATCATGTATGCACATTCATATGTGGGTATATGGTTGGGTTTCTAAGGTCATGGAAAGTCTCTCTGGTGGTATTCTCAGTCACCCCAGTGACCATGTTCTGTGGTATAGCTTACAAGGGTATATATGGTGGACTATCTGCAAAAGAGGAAGTTTCTTATAGGCAAGCTGGTAGCATTGCAGAGCAGACCATCAGTTCAATTAGGACAGTATTCTCTTTTGTTGCAGAAAGCCAGTTGGCCACAAAATATGCTGAACTGCTGCAAAAATCAGTCCCAGTTGGGGCAAAAATTGGTTTTGCTAAGGGTTTAGGCGTGGGAGTTATCTATTTGGTAACCTATTCAACATGGGCCTTGGCTTTCTGGTATGGTTCCATCCTAATTGCTAGGGATGAGATTGATGGAGGTGCAGCCATTGCCTGTTTCTTTAGTGTCATGGTAGGGGGAAGAGGCTTGGCACTGGCACTTTCATATTTTGCACAGTTTGCACAAGGCATTGTTGCAGCAAGCCGAGTATTTGAAATTATAGATAGGATCCCCGAGATTGATCCCTACAGCCCTGAGGGAAGGAAGCTTTCTAGTGTTCGTGGAAGAATTGAGTTCAAAAATGTTAGTTTTGCATACCCTTCTCGTCCTGATGCTCTAATCCTTCATTCTCTCAAATTAGTGATTCCATCTTCAAGAACTGCAGCACTGGTTGGCGCCAGTGGAGGGGGCAAGTCCACCATTTTTGCTCTCATTGAGAGGTTTTATGACCCTTTTGAAGGGATAATAACCTTGGATGGTCATGATTTGAAGACACTGCAAGTGAAGTGGCTAAGAGATCAGATAGGAATGGTAGGTCAGGAGCCGATTCTCTTTGCCACAACCATACTGGAAAATGTGATGATGGGGAAGGACAAAGCCACCAAGAAAGAGGCAATTGCTGCTTGCATTGCTGCCGATGCCCACAACTTCATCTCTAGCCTACCCCTAGGCTATGACACTCAGGTTGGAGACAGAGGTACCCAAATCTCAGGGGGTCAAAAGCAGCGAATTGCTTTGGCGCGAGCCATGATCAAAGATCCTAAAATTCTTCTTTTAGATGAACCTACCAGTGCTCTTGATGCTGAGTCAGAGTCCGTGGTCCAAAAGGCCATTGACAAGATTTCTGCTGGCCGAACAACCATTGTCATTGCTCACAGGATAGCAACAGTAAAGAATGCTCATACCATTGTGGTTCTTGAAAATGGTTCTGTAAGCGAGATTGGTGACCATCGGCAGCTTATGGGAAAGGCAGGTGCCTACTATAACCTGGTCAAGCTTGCTACAGAAACCATTTCAAAACCGGAGTCTAAAGAAAATTTTATACAAAAGGTCAGTGATTTTACCATCTATGACAAATCAGTTCCTGATGTATCAAGATCAAGATATACTGTTGATACCTCAAGGTCTAAGTACTTAAAGTCCATGCAAGATGAAAAACAAGTAGAAATGGGAGAAGATCAACAGAACAAGTCAAGAAATTTCCGACTTTCTGAGATATGGAAACTGCAGAAACCAGAGTCTGTGATGCTGTTTTCAGGATTTCTTCTGGGCATGCATGCAGGTGCTTTTCTGTCCCTTTTTCCATTGGTTTTAGGCCTAGCTCTTGGAGTATACTTTGATGATGACCTTTCAAAGATGAAAAGAGATGTAGGATATCTTTGTATAGCACTTGTTGGGCTTGGATTTGGTTGCATCATTTCCATGACAGGACAGCAAGGTTTGTGTGGTTGGGCTGGAACAAAGCTCACAATGAGGGTAAGAGACCTTCTGTTTCGATCCATACTAAAACAAGAACCAGGGTGGTTTGATTTTGATGACAACTCCACTGGAGTGCTATTGTCAAGGTTATCTATTGACTGTATTAGTTTTCGATCAGCATTTGGTGATCGATTTTCGGTCCTTCTAATGGGGTTATGCTCAGCTGCTGTAGGGCTTGGTGTGTGCTTTTACTATGAATGGAGATTAACCCTAGTGGCTGCTGCTCTAACTCCTCTCACTCTGGGTGCAAGCTATCTGAATTTGATCATAAACATCGGGCCACGAGTTAACAACAATTCTTATGCCAGAGCCAGCAATATTGCTTCTGGTGCAGTTTCAAACATAAGAACAACAACTGCATTTTCTTCCCAAGAACAGATAGTCAAGTCCTTTGATAGAGCCTTATCAGAACCTAGGAAAAAATCAGTAAAAAGGTCACAGATTCTTGGTCTAACACTTGGGTTCTTCCAAGGTGCCATGTATGGGGCATACACCTTAACCCTTTGGTATGGTTCCCACCTTGTAAAACAAGATGCCACAAATTTTACGGACGTGTACAAGATTTTTCTCATCCTTGTTTTGAGCTCATTTTCCGTGGGACAACTAGCTGGTTTAGCACCAGATACTTCTTTGGCAGCTACAGCAATTCCTGCAGTTCTGGATATCATAAACCGACAGCCATTGATAAGCAACAATAATATAGAAGGTAGGAAACTAGAAAGATCAAAGCAATTGAAGCTAGAATTCAAAATGGTGACATTTGCGTACCCATCTAGGCCTGAGGTTGTAGTGTTGAGGAATTTCAGTTTGAAGATTAAAGGTGGAAGTGCAGTTGCCCTAGTAGGGTCAAGTGGATCAGGAAAATCAACGGTGATATGGTTGATACAGAGGTTCTATGATCCAAATCAAGGGCAGGTGATGATGGGTGGGGTAGATTTGAAAGACCTTGATTTGAAGTGGTTGAGGAGGCAAACAGCTTTGGTGGGTCAAGAACCTGCACTGTTTGCTGGGAGTATAAGGGAGAACATTGCCTTTGCAGATCCAGATGCTTCATGGGCTGAAATTGAAGTTGCAGCAAAGGAAGCTTACATTCACAAATTCATCAGTGGCCTTCCTCAAGGTTATGAAACTCAGGTTGGAGAAAGTGGGGTCCAGCTATCAGGTGGACAAAAACAGAGGATTGCCATAGCAAGGGCCATACTGAAGAAATCAAGGGTGCTGCTTCTTGATGAAGCGAGTAGTGCCTTGGACTTGGAATCAGAGAAGCATGTCCAAGAAGCACTCAAGAATGTTGCAAAAGATGCAACAACCATAATAGTGGCCCATCGTCTTTCTACAATCAGGGATGCTGATAACATCGCAGTTATGAGAGATGGGTCAGTGGCTGAGTATGGAAGCCATGATGCTCTCATGGCTTCCAATCATAATGGTTTGTATGCTTCTTTGGTTCGTTCTGAGTCTGAAGCCAATGCCTTTTCTGGGTTTCAGTGA 4524 0.4447 MADSSFEIDYYSSGHYPPGGNPPTPVSSRNTSRSFAAASSSRSNLNSRRGRRSRATAASGDDHSWQTEVSWQFEPTGWREYSNRNLGSVLSPWAASPSPSDRSRVFIRSAKDYYLSRTSGFFRGSGFAKNSYSENSGYAVPSGRVELQSYVAQENDDQRSKSYNGFSNLEIIKEGIVGRKKNSPLAAEDELSFTSFSIGHDRELSHVKHDNYGDYDGHYVADHGPVVPSHGIGSHGGGGEYSHYGIDKFSGFDGDGGEEMDDGDVEPAKSVGLLSLFRYSTMWDIVLVILGCFGALINGGSLPWYSYLFGKVVTKIATESKDGGDKSQMIKDVEKICIFMTGLAAVVMVGAYLEITCWRLVGERSAQRIRSEYLSAVLRQDISFFDTEISTADIMHGIASDVAQIQEVMAEKMAHFVHHVCTFICGYMVGFLRSWKVSLVVFSVTPVTMFCGIAYKGIYGGLSAKEEVSYRQAGSIAEQTISSIRTVFSFVAESQLATKYAELLQKSVPVGAKIGFAKGLGVGVIYLVTYSTWALAFWYGSILIARDEIDGGAAIACFFSVMVGGRGLALALSYFAQFAQGIVAASRVFEIIDRIPEIDPYSPEGRKLSSVRGRIEFKNVSFAYPSRPDALILHSLKLVIPSSRTAALVGASGGGKSTIFALIERFYDPFEGIITLDGHDLKTLQVKWLRDQIGMVGQEPILFATTILENVMMGKDKATKKEAIAACIAADAHNFISSLPLGYDTQVGDRGTQISGGQKQRIALARAMIKDPKILLLDEPTSALDAESESVVQKAIDKISAGRTTIVIAHRIATVKNAHTIVVLENGSVSEIGDHRQLMGKAGAYYNLVKLATETISKPESKENFIQKVSDFTIYDKSVPDVSRSRYTVDTSRSKYLKSMQDEKQVEMGEDQQNKSRNFRLSEIWKLQKPESVMLFSGFLLGMHAGAFLSLFPLVLGLALGVYFDDDLSKMKRDVGYLCIALVGLGFGCIISMTGQQGLCGWAGTKLTMRVRDLLFRSILKQEPGWFDFDDNSTGVLLSRLSIDCISFRSAFGDRFSVLLMGLCSAAVGLGVCFYYEWRLTLVAAALTPLTLGASYLNLIINIGPRVNNNSYARASNIASGAVSNIRTTTAFSSQEQIVKSFDRALSEPRKKSVKRSQILGLTLGFFQGAMYGAYTLTLWYGSHLVKQDATNFTDVYKIFLILVLSSFSVGQLAGLAPDTSLAATAIPAVLDIINRQPLISNNNIEGRKLERSKQLKLEFKMVTFAYPSRPEVVVLRNFSLKIKGGSAVALVGSSGSGKSTVIWLIQRFYDPNQGQVMMGGVDLKDLDLKWLRRQTALVGQEPALFAGSIRENIAFADPDASWAEIEVAAKEAYIHKFISGLPQGYETQVGESGVQLSGGQKQRIAIARAILKKSRVLLLDEASSALDLESEKHVQEALKNVAKDATTIIVAHRLSTIRDADNIAVMRDGSVAEYGSHDALMASNHNGLYASLVRSESEANAFSGFQ 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1547 1507 ProSitePatterns ABC transporters family signature. 1397 1411 IPR017871 GO:0005524|GO:0016887
Bisa06g1547 1507 CDD ABC_MTABC3_MDL1_MDL2 1259 1495 - -
Bisa06g1547 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 851 IPR003439 GO:0005524
Bisa06g1547 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1258 1494 IPR003439 GO:0005524
Bisa06g1547 1507 SUPERFAMILY ABC transporter transmembrane region 923 1238 IPR036640 GO:0005524|GO:0016020
Bisa06g1547 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 938 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1547 1507 Pfam ABC transporter transmembrane region 288 564 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1547 1507 Pfam ABC transporter transmembrane region 937 1206 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1547 1507 CDD ABC_MTABC3_MDL1_MDL2 615 852 - -
Bisa06g1547 1507 SMART AAA_5 1285 1471 IPR003593 GO:0016887
Bisa06g1547 1507 SMART AAA_5 642 843 IPR003593 GO:0016887
Bisa06g1547 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 851 IPR027417 -
Bisa06g1547 1507 Gene3D ABC transporter type 1, transmembrane domain 338 1099 IPR036640 GO:0005524|GO:0016020
Bisa06g1547 1507 Gene3D ABC transporter type 1, transmembrane domain 1108 1255 IPR036640 GO:0005524|GO:0016020
Bisa06g1547 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1254 1495 IPR027417 -
Bisa06g1547 1507 ProSitePatterns ABC transporters family signature. 754 768 IPR017871 GO:0005524|GO:0016887
Bisa06g1547 1507 FunFam ABC transporter B family member 1 1247 1498 - -
Bisa06g1547 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 289 580 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa06g1547 1507 MobiDBLite consensus disorder prediction 25 61 - -
Bisa06g1547 1507 FunFam ABC transporter B family member 4 605 859 - -
Bisa06g1547 1507 MobiDBLite consensus disorder prediction 1 61 - -
Bisa06g1547 1507 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 1109 1249 - -
Bisa06g1547 1507 PANTHER ABC TRANSPORTER B FAMILY 264 851 IPR039421 -
Bisa06g1547 1507 Gene3D - 613 865 IPR027417 -
Bisa06g1547 1507 Gene3D - 1256 1498 IPR027417 -
Bisa06g1547 1507 CDD ABC_6TM_Pgp_ABCB1_D1_like 289 588 - -
Bisa06g1547 1507 Pfam ABC transporter 633 782 IPR003439 GO:0005524
Bisa06g1547 1507 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Bisa06g1547 1507 SUPERFAMILY ABC transporter transmembrane region 276 600 IPR036640 GO:0005524|GO:0016020
Bisa06g1547 1507 CDD ABC_6TM_Pgp_ABCB1_D2_like 925 1240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1547 Bisa-ChrBisa06 52987657 52995683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1547 966 1501 Calmodulin-binding Proteins AT2G36910 39.963 1.96e-108 373