Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1534 ATGGCCGCCATAACCACCGCCGCGCCGCCACGTCAGCTGTCTCAAAAGGAGGCTGACGTTCAAATGATGTTGGCTGCAGAGGTGCATTTGGGAACAAAAAACTGTGATTTTCAAATGGAGCGATATGTTTTCAAGCGCCGGAACGATGGTATTTACATTATAAATCTTGGAAAAACATGGGAGAAGCTACAGCTTGCTGCTAGGGTTATAGTTGCCATTGAGAACCCTCAGGATATTATTGTTCAGTCTGCAAGGCCTTATGGTCAGAGAGCAGTTCTTAAGTTTGCTCAGTACACTGGCGCCCATGCAATTGCAGGAAGACACACTCCTGGTACATTCACTAATCAGCTTCAGACATCATACAATGAGCCTCGCCTTCTTATTTTAACTGATCCAAGAACAGATCATCAGCCCATTAAGGAAGCTGCTCTTGGAAATATACCGACAATTGCCTTCTGTGACACTGATTCTCCTATGAACTATGTTGATATTGGGATTCCTGCTAATAATAAGGGGAAACATAGCATCGGTTGTCTCTTCTGGCTTCTAGCAAGGATGGTACTGCAGATGCGGGGCACTATTAGTCCAGGGCATAAGTGGGATGTCATGGTGGATTTGTTCTTCTATAGGGAACCTGAGGAGGCCAAACAAGAAGAGGAAGATGAACTGCCCGTTGCCCCAGAGTATGCCATCACAGACTTTAATGCAGCTGCAATCAGTGGCCTGCCTGCTGATGGCCAGTGGCCTGCTGCAACTGATCAACCCTGGACTGAAGCTGTTCCACCACCAATTCCAGCAGTCCCCGGTGTCCACTGGACCCCAGAAGCTGCTGTTGCAGGAGATTGGGCTGAGGCTGTTCCAGCTCCAACAGTTCCTGCTCCAGTTGAATCTGCTCCTCCCACTGGCTGGGAATAA 915 0.4842 MAAITTAAPPRQLSQKEADVQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTISPGHKWDVMVDLFFYREPEEAKQEEEDELPVAPEYAITDFNAAAISGLPADGQWPAATDQPWTEAVPPPIPAVPGVHWTPEAAVAGDWAEAVPAPTVPAPVESAPPTGWE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1534 304 PRINTS Ribosomal protein S2 signature 141 152 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 PRINTS Ribosomal protein S2 signature 20 38 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 PRINTS Ribosomal protein S2 signature 50 59 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 PRINTS Ribosomal protein S2 signature 162 176 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 PRINTS Ribosomal protein S2 signature 99 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 PRINTS Ribosomal protein S2 signature 124 141 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 ProSitePatterns Ribosomal protein S2 signature 2. 124 148 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 SUPERFAMILY Ribosomal protein S2 15 205 IPR023591 -
Bisa06g1534 304 ProSitePatterns Ribosomal protein S2 signature 1. 20 31 IPR018130 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 Gene3D - 19 223 - -
Bisa06g1534 304 Pfam Ribosomal protein S2 23 117 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 Pfam Ribosomal protein S2 120 187 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 NCBIfam 30S ribosomal protein S2 15 211 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bisa06g1534 304 CDD RPS2 23 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bisa06g1534 304 PANTHER 40S RIBOSOMAL PROTEIN SA 10 291 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bisa06g1534 304 Hamap 40S ribosomal protein SA [rps-0]. 7 251 IPR027498 GO:0003735|GO:0006412|GO:0015935
Bisa06g1534 304 FunFam 40S ribosomal protein SA 19 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1534 Bisa-ChrBisa06 52780105 52782421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1534 1 304 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 69.935 9.63e-154 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1534 06 52780105 52782421 Bisa06g1534 06 52780105 52782421 ECH