Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1520 ATGTGTGGAGGGGCTATTATCTCCGACTTCATTCCGGCAGCGGCGGCGAGGAGGGCCAAGTCTCGCCCGCTTACAGCCGATTATCTCTGGCCGGATTTGAAGAAACCCGGTTCGGGGAAGCGATTCTCGAAGCCCTCTAGGTCTGAGGTCGTCGATTTGGATGATGATTTTGAAGCTGATTTTAGAGGATTCAAGGATGATTTCGATGTCGATGATGTGGATGAAGATGATGATTTGATGTTCGATGTCAAACCCTTTGGGTTCTCCGCCACCAAACCCTCTAAGCCTTCCAAATCCCTTTCTCGTGGATCTGGAGCTGTAAAATCTGTGGAATCCAATGGTCAAGCTAACAAGCCTGAGAAGAGAAAGAGGAAGAATAAGTATAGAGGAATTCGTCAGCGCCCATGGGGAAAATGGGCAGCTGAGATTCGTGACCCAAGAAAGGGTGTTCGTGTCTGGCTTGGAACCTTCAACACTGCTGAAGAAGCTGCTAGAGCATATGATGCTGAAGCACGCAGGATTCGTGGCAGGAAAGCCAAGGTGAACTTCCCTGACGAGGCTTCAGGCGCTTCTCCAAAACGTCACAAGGCAAATCAGAACTCAGTTCAGTCCAATATGAACCAGAATTCTAATGTCGGAAACAATCTGGAGGATTACTTCTGTCCTACTTTTCAGATGGAACAGAAACCACTGATTAATCAGTATGTTAATATGGGGGCCTTCTCTGGCAGTGGAGATGGGCTCACATCTCTTGCACCATCAGATGATGTTACTCGTTGTTTTAGTTCAGATCAAGCGAGTAATTCATTTGATTATTCAAATCTTGGATGGGGTGAACAGGGCCCAAAGAGTCCCGACATCTCCTCCCTCCTTTCTGCTCCTGTGGAAGATGAATTTCTAGCTGTGAAAGATGCCAACCAGAATACAAATCTTCCCAACTCTCAGGGTGTAATACGCCTTATCTTGGTGGGAGCTGGGATGATGCTTCCTTAG 993 0.4743 MCGGAIISDFIPAAAARRAKSRPLTADYLWPDLKKPGSGKRFSKPSRSEVVDLDDDFEADFRGFKDDFDVDDVDEDDDLMFDVKPFGFSATKPSKPSKSLSRGSGAVKSVESNGQANKPEKRKRKNKYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGRKAKVNFPDEASGASPKRHKANQNSVQSNMNQNSNVGNNLEDYFCPTFQMEQKPLINQYVNMGAFSGSGDGLTSLAPSDDVTRCFSSDQASNSFDYSNLGWGEQGPKSPDISSLLSAPVEDEFLAVKDANQNTNLPNSQGVIRLILVGAGMMLP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1520 330 FunFam Ethylene-responsive transcription factor 2 126 185 - -
Bisa06g1520 330 PANTHER DNA-BINDING DOMAIN 101 214 IPR044808 GO:0003700|GO:0009873
Bisa06g1520 330 SMART rav1_2 127 190 IPR001471 GO:0003700|GO:0006355
Bisa06g1520 330 Gene3D AP2/ERF domain 126 185 IPR036955 GO:0003700|GO:0006355
Bisa06g1520 330 ProSiteProfiles AP2/ERF domain profile. 127 184 IPR001471 GO:0003700|GO:0006355
Bisa06g1520 330 MobiDBLite consensus disorder prediction 92 114 - -
Bisa06g1520 330 SUPERFAMILY DNA-binding domain 127 186 IPR016177 GO:0003677
Bisa06g1520 330 MobiDBLite consensus disorder prediction 91 131 - -
Bisa06g1520 330 CDD AP2 127 185 IPR001471 GO:0003700|GO:0006355
Bisa06g1520 330 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
Bisa06g1520 330 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Bisa06g1520 330 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1520 Bisa-ChrBisa06 52540737 52543079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1520 1 305 AP2-EREBP Transcription Factor Family AT3G14230 50.462 9.46e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa06g1520 AP2 8.7e-13 CL0081