Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1498 ATGAGCAAGTTGAAACAAATCATCGCCGGAATCTCAGATTCCGGCAACCACAAGAAAAAGAAGAACCTCTTCCTGACTCTTTTCGCTACTCTCCTCCTCGTCGCCGCCATAATCGGCATCGTCGCCGGAGTATACTCCCGCCAAAATTCCTCCGGTGGCGAAAATTTGAATTCCTCCACCCATCCATCCCACGCCATAATCAAATCGGCTTGCAGCGCCACACTGTACCCCGAGCTCTGCTTCTCCGCCATCTCCTCCGAGCCAGGATTCACCGAGAAAGTCTCCTTGCCCCGTGACGTCATCGAATTGTCGTTAAATATAACCACCAGAGCCGTCGAGCACCACCTCTTCACCGTCGAGAAGCTGATTGCGACCAGGAAGGGAAGCCTCACGGTGAGAGAGAAAACCGCGCTTTACGATTGCCTGGAGACGATCGACGAGACGCTCGACGAGCTCCACACCGCAATGGAGGATCTGAAAGTGTATCCCGACAAGAAGTCGCTGCACCAGCACGCCGACGATCTGAAGACGCTCATCAGTGCCGCCATAACCAACCAGGTCACGTGCCTGGACGGATTATTGCTGGACGGCGCCGACGAGAAGGTCAGGGGAGCTCTGGAGGCAGGGCTGGTGCACGTGGAGCACATGTGCAGCAACGCTCTGGCGATGATCAAGAACATAACAGACACGGATGTGGCGAATTACGAGAGGAAGACGGGAATTACGAAGAGCCGGAGGCTGATGGAGGCGGAGGAGGGGGAGGAGGGCGGCGTGCTGTGGCCAGAGTGGATCTCGGCGGCTGACAGGCGGTTGTTGCAGGCAGCGGAGGTGAAGCCTGACGTAGTGGTGGCGGCGGACGGGAGCGGCAATTTTAAGACGGTGTCGGAGGCGGTGGCAGCGGCGCCTCAGAAAAGTAGTAAGAGATACGTGATTAAGATCAAAGCAGGGGTTTACAGAGAGAATGTGGAGGTTCCGAAGAAGAAGACGAACATCATGTTCTTGGGCGATGGAAGAACTAGCACTATTATTACAGGAAGCAGAAATTTCGTTGATGGCAGCACAACATTCCATTCCGCCACTGTCGCCGTCGTCGGAGAACGGTTCCTCGCCCGCGACCTGACCTTCGAGAACACTGCCGGCCACGCCAAGCACCAAGCAGTCGCCCTCCGTGTCGGCGCCGACTTATCGGCCTTCTATAACTGCCACATCCTCGCCTACCAGGACACCCTCTATGTCCACAACAACCGCCAGTTCTTCGTCAACTGTCTCATCGCCGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGCCGTCCTCCAGGACTGCGACATCCACGCTCGCCTCCCCGGCTCCGGCCAGAAGAATATGGTGACCGCGCAGGGCCGCGTCGACCCGAACCAGAACACCGGCATCGTCATCCAGAAGTGCCGTATCGGAGCCACGAAGGACCTCGAGGCGGCACCCAAGGAGAGCTTCCCAACGTTCCTCGGCCGGCCGTGGAAGGAATACTCAAGGACGGTGATAATGCAGTCGAACATTAGCGACGTGATCGATCCGGCGGGGTGGCACGAATGGCATGGGGATTTTGCATTGGACACACTGTTCTACAGAGAGTATCAGAACACCGGGGCTGGTTCGGGCACGTCCAAGAGGGTTCAGTGGAAAGGGTTTAAGGTTATGACCAACGCTTCCGAGGCTGAGAGTTTCACTGCGGCTAATTTCATTGGTGGGTCTAGCTGGTTGGGGTCCACAGGGTTTCCCTTCTCTCTGGGTCTCAAGATTGCTTCATGA 1791 0.569 MSKLKQIIAGISDSGNHKKKKNLFLTLFATLLLVAAIIGIVAGVYSRQNSSGGENLNSSTHPSHAIIKSACSATLYPELCFSAISSEPGFTEKVSLPRDVIELSLNITTRAVEHHLFTVEKLIATRKGSLTVREKTALYDCLETIDETLDELHTAMEDLKVYPDKKSLHQHADDLKTLISAAITNQVTCLDGLLLDGADEKVRGALEAGLVHVEHMCSNALAMIKNITDTDVANYERKTGITKSRRLMEAEEGEEGGVLWPEWISAADRRLLQAAEVKPDVVVAADGSGNFKTVSEAVAAAPQKSSKRYVIKIKAGVYRENVEVPKKKTNIMFLGDGRTSTIITGSRNFVDGSTTFHSATVAVVGERFLARDLTFENTAGHAKHQAVALRVGADLSAFYNCHILAYQDTLYVHNNRQFFVNCLIAGTVDFIFGNAAAVLQDCDIHARLPGSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEAAPKESFPTFLGRPWKEYSRTVIMQSNISDVIDPAGWHEWHGDFALDTLFYREYQNTGAGSGTSKRVQWKGFKVMTNASEAESFTAANFIGGSSWLGSTGFPFSLGLKIAS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1498 596 PANTHER PECTINESTERASE 32 582 - -
Bisa06g1498 596 Gene3D - 274 592 IPR012334 -
Bisa06g1498 596 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 228 IPR035513 -
Bisa06g1498 596 FunFam Pectinesterase 63 228 - -
Bisa06g1498 596 CDD PMEI-like_3 69 228 - -
Bisa06g1498 596 Pfam Plant invertase/pectin methylesterase inhibitor 66 223 IPR006501 GO:0004857
Bisa06g1498 596 SUPERFAMILY Pectin lyase-like 277 591 IPR011050 -
Bisa06g1498 596 Pfam Pectinesterase 280 577 IPR000070 GO:0030599|GO:0042545
Bisa06g1498 596 NCBIfam pectinesterase inhibitor domain 58 227 IPR006501 GO:0004857
Bisa06g1498 596 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Bisa06g1498 596 SMART PMEI_2 62 223 IPR006501 GO:0004857
Bisa06g1498 596 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 228 IPR035513 -
Bisa06g1498 596 FunFam Pectinesterase 274 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1498 Bisa-ChrBisa06 52032877 52039688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1498 18 592 Carbohydrate Esterase AT3G14310 67.973 0.0 785