Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1492 ATGGGTGACTTGTCAGGAACAAATAACACACTGGACGACTCTCCGGCGATGGCAATGACCGGCAAGATTATGGTGGCTGCAATAATAATCCTCTTCTTCGTCGTAGTGGTCGTCTGCTTCCTTCATCTCTACGCGAGATGGTTTTGGTGGCGCATTGAAGGAGGCAGCACTGCTTCCCACCTCAGCCACAGCCGCCGCCGCCGCCGACGATTTGTCTTCTCCCCCGGTCAAGACCCGCCTATCTACGGCGCTCAGAGAAGTGGACTCGACCCGGAAGTCCTCAGATCCATCCCCATATTGGTGTACCAACCAGAAGACTTCAAAGATGGGTTGGAATGCGCAGTTTGTCTCTGTGAGCTCGAACATGGAGAAAAGGCAAGGCTCTTACCCAAATGCAATCATGGATTTCATGTAGATTGCATAGACATGTGGTTCCATTCCCATTCTACATGTCCGCTTTGTAGGAACCCTGTTGCTTCTGAGTCCTTTGAATCCCGTTGTAGCACAGGTGTTCGAGAAAATGCCTCAGAGAGTAATAGTCAGTCATCAGACGAATCAGAAAGCTCAGATGCTATGAGTGAGATAGATTTGGAGTCTTCAAGTTTTCCCACAAACGTGTTAATCTGGGGGAACCAAACCCATGTAAGTTCTGTTGGTGTTGGTTCTTCCATGGAAGAAGGCACTTCATCTTCTTCCGCAGCTGGTAGTAGCAGCCGTAGTAGTAATAATAATAATAAGAATAATATTAATAGACGTCAAGGAATGTTGGTGATTGATATCCCAAATGGGGTCAATCCATCTTCCTTATCACCTTCTACCAGTAGGTTTGCTGAAGATGATCTGAAGTCACCAATCACATCGAGATTGAAGTCATTGACGAGGATTTTAAGCCTGAAGTTCAGTCCTCGCAGTCCCAGTTCCACAGATGTGGAACAAGGGAGGGGACAGAGCTAG 954 0.4748 MGDLSGTNNTLDDSPAMAMTGKIMVAAIIILFFVVVVVCFLHLYARWFWWRIEGGSTASHLSHSRRRRRRFVFSPGQDPPIYGAQRSGLDPEVLRSIPILVYQPEDFKDGLECAVCLCELEHGEKARLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVASESFESRCSTGVRENASESNSQSSDESESSDAMSEIDLESSSFPTNVLIWGNQTHVSSVGVGSSMEEGTSSSSAAGSSSRSSNNNNKNNINRRQGMLVIDIPNGVNPSSLSPSTSRFAEDDLKSPITSRLKSLTRILSLKFSPRSPSSTDVEQGRGQS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1492 317 MobiDBLite consensus disorder prediction 170 195 - -
Bisa06g1492 317 CDD RING-H2_EL5-like 112 155 - -
Bisa06g1492 317 SMART ring_2 113 154 IPR001841 -
Bisa06g1492 317 MobiDBLite consensus disorder prediction 219 284 - -
Bisa06g1492 317 MobiDBLite consensus disorder prediction 219 252 - -
Bisa06g1492 317 FunFam RING-H2 finger protein ATL3 82 160 - -
Bisa06g1492 317 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 18 160 IPR044675 -
Bisa06g1492 317 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Bisa06g1492 317 MobiDBLite consensus disorder prediction 263 284 - -
Bisa06g1492 317 SUPERFAMILY RING/U-box 93 159 - -
Bisa06g1492 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 160 IPR013083 -
Bisa06g1492 317 Pfam Ring finger domain 112 155 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1492 Bisa-ChrBisa06 51968930 51969883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1492 21 297 C3H Transcription Factor Family AT1G53820 40.956 2.79e-64 203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1492 06 51968930 51969883 Bisa06g1492 06 51968930 51969883 ECH