Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1476 ATGGCTTCCCAATCTCCTGTGCTGGATTTAGTGCCTGTTGGGTTCAGATTCCTTCCCACGGATGAAGAACTGGTAGGCCACTACTTGAAGCACAAACAGGCCGGCGATGATTTCGTTTTCCAGGTTATCCGCGAGATTGACGTTTGCAAGCACGAACCTTGGGATTTGCCAGGCCTGAAACTTCAACATTCATCTATTCATTGGAATGAAGTGGTTCTTGACATTATTAGTTCTTACTTTATTAAAACTAGGACCTTTGTTCTATGCCGGTTAATGAAGAAACACGAGCAAAAAGCAGCAGATAAGGTCTGTGATGAAGGAGAGCCAAGTAACCGTATGGCTTCTTCCTGTGTAAATCAACCAAGTGAGGGTAGAATTCCAGAGGTTCCTTCTTGGTCAGAAGGGAATCTGGATTTTTGCTTTCCGAGGTCACCTCAGCCCGAAGAATATCCGATACAATTTCCCCTGTTACCCAGTTCCAATATTGGAAATGATAACAGCGGTGCAGACTTTCCTTTCGAAACTACCGAAGAGGAAGACAATCTCAATTACTTTGCGGATTCGTTTTTGATCTTCAACGAGGAAAGGAAACATGCTCTTGTCAATGACTCTATCCCCCGAGAGTCATTGAGAATGTACTATGAAAGCAGTGGCTCAGATGCTGAAGTTGTGTCTGCACGGTATGGAAATATTCCAGATACTTCAGCAGAGAAAAAGGTTGTATCCTTTCAAGATGATGTCTGGGGAGTGGACACTTCCTCGTCTGACTCAACTGCAACTAGATCTCCTTCCACTCTAAGAACATGCAAGACTGAACATCAACCGAGATCAGCCAACTCGGTGATACAGAGAGCCGGGGCAAGAAGATCTCAAACACAGACAAAGGTTTCAACCAAAGCATCCTATCATGAGGCTCAGAAGGAAACAATCAAGGAATCAAACAGTAAACAGAGAAAAGCCCAGGGTTCCATGTCGAGAAACACTTCGGAAGCTCAAAGCACTCAGTCCTCTGATACTGGTGGGAGGGGTTCTTTCATCCACATGGAAACTCCTCCATTAAGCCAAAATCTCAGTCCACCATCGGAATATCTTGTAAATGTAGTTCTTGGGTTTTTTCTGTTTATAGGCATTATCTGGGAAATTATATCATGTGGGAAGTTCTGA 1164 0.439 MASQSPVLDLVPVGFRFLPTDEELVGHYLKHKQAGDDFVFQVIREIDVCKHEPWDLPGLKLQHSSIHWNEVVLDIISSYFIKTRTFVLCRLMKKHEQKAADKVCDEGEPSNRMASSCVNQPSEGRIPEVPSWSEGNLDFCFPRSPQPEEYPIQFPLLPSSNIGNDNSGADFPFETTEEEDNLNYFADSFLIFNEERKHALVNDSIPRESLRMYYESSGSDAEVVSARYGNIPDTSAEKKVVSFQDDVWGVDTSSSDSTATRSPSTLRTCKTEHQPRSANSVIQRAGARRSQTQTKVSTKASYHEAQKETIKESNSKQRKAQGSMSRNTSEAQSTQSSDTGGRGSFIHMETPPLSQNLSPPSEYLVNVVLGFFLFIGIIWEIISCGKF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1476 387 MobiDBLite consensus disorder prediction 301 315 - -
Bisa06g1476 387 Gene3D NAC domain 20 98 IPR036093 GO:0003677|GO:0006355
Bisa06g1476 387 Pfam No apical meristem (NAM) protein 12 64 IPR003441 GO:0003677|GO:0006355
Bisa06g1476 387 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 81 - -
Bisa06g1476 387 SUPERFAMILY NAC domain 9 64 IPR036093 GO:0003677|GO:0006355
Bisa06g1476 387 MobiDBLite consensus disorder prediction 316 357 - -
Bisa06g1476 387 ProSiteProfiles NAC domain profile. 11 179 IPR003441 GO:0003677|GO:0006355
Bisa06g1476 387 MobiDBLite consensus disorder prediction 250 300 - -
Bisa06g1476 387 MobiDBLite consensus disorder prediction 250 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1476 Bisa-ChrBisa06 51720551 51722864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1476 8 61 NAC Transcription Factor Family AT1G33060 61.111 3.36e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa06g1476 NAM 1.3e-12 No_clan