Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1467 ATGGAATTGATGCAAGATAAAGGGTATTCTGATCACAGCAGAGAAGAAGAAGAAGAATTACCGGAGGAAGAAGAGGAATTGTTAGCAGAGTCGACGAGTCATAAAGAAAGCAGTATTAAGCAACAACAATACTATCCCTTCTCTTCTTCTTCTAATTCACCCTCAACCTCAAATCAATGGTTGGGAATGCTCCATCCTCATCCTCATCATCATCAATCTCCAGAGGCCGCAACAACCCCTACTTCTGAATCTCACAATTCATCCTCCTCCTCATCGTTCTTAGGGTTACACCATCAAGAATATGCCCCTAATAGTTCCAATTCCAATCGGAAGCTCGATCTCACGGACTTGTCTCTTGGAAACAAAAACGACGTCGTTGAGGAAGCAAGCAATTTCCACGCCACTAATGATTCCTCTGCTAACGACCCCATCCAGAAGGAACATATGTTCGACAAGGTTGTCACGCCGAGCGATGTCGGAAAACTGAACCGTCTGGTGATTCCGAAGCAGCATGCGGAGCGATTTTTTCCGTTGGATTCCTCCACCAATGATAAGGGCCTCCTGTTGAACTTCGAGGACCGGACCGGGAAGCTGTGGCGGTTCAGGTACTCATACTGGAACAGCAGCCAGAGCTACGTGATGACCAAGGGCTGGAGCCGCTTCGTCAAGGAGAAGAAGCTCGACGCCGGCGACATCGTCTCCTTCCAGCGTGGCATGGGGGAGTTGTATAGACATAGGTTGTACATAGACTGGCGTCGTCGCCCCGATCACGCCGCCAACATCAACGCCGCCATTGGCTTCGATCACCATCTTCATCATCATCACCATTCTGCCGCTGGCCTGATTACACCGTTGCTTCTTCCGACGCCAAGCCAGTACTCCGTCAGATGGGGCGGCAGGTTTTACTCGCTCCCTCCGAGGCCTGCGGTGCCTGCGAATTACCACAATTACCCCTTTCAGCAGCGGGAAAACCATCTCTATGGTGGAAGTCATGGAAGCTATAATAATAATGAGCTGAATTTGGGATCTGGATCGCTTTACTATTACAGGTCACCGGCTACGGGAGATCGGAGCCTGCGAGAGGGAGGTAGCAATGTTGCTCCGGTGATCATCGATTCCGTGCCGGTGGCTCATGGCAAGAGCGGGAGCGGCGGCGGCGGGGGCAGCGGTGGTAAAACTGGTGATAGTGCTGGAAAGAGGCTTAGACTATTTGGAGTAAACATGGAATGTTCTTCATCGTCATCTTCAATTCCCTTACCAAATAATCTTCAGTATCTGAGGGAATCTCATGAAGAAGAAGAAGACCCAAATACAGCGAGGTTTGGGGATCAAAAGGGGGAAAGACAAACTTCAGTGCTTTTTGATTTGAACCCTTCCAGCTTCCAACACAGGCAGTAG 1398 0.4986 MELMQDKGYSDHSREEEEELPEEEEELLAESTSHKESSIKQQQYYPFSSSSNSPSTSNQWLGMLHPHPHHHQSPEAATTPTSESHNSSSSSSFLGLHHQEYAPNSSNSNRKLDLTDLSLGNKNDVVEEASNFHATNDSSANDPIQKEHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSTNDKGLLLNFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGMGELYRHRLYIDWRRRPDHAANINAAIGFDHHLHHHHHSAAGLITPLLLPTPSQYSVRWGGRFYSLPPRPAVPANYHNYPFQQRENHLYGGSHGSYNNNELNLGSGSLYYYRSPATGDRSLREGGSNVAPVIIDSVPVAHGKSGSGGGGGSGGKTGDSAGKRLRLFGVNMECSSSSSSIPLPNNLQYLRESHEEEEDPNTARFGDQKGERQTSVLFDLNPSSFQHRQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1467 465 SMART B3_2 150 255 IPR003340 GO:0003677
Bisa06g1467 465 MobiDBLite consensus disorder prediction 410 465 - -
Bisa06g1467 465 MobiDBLite consensus disorder prediction 1 15 - -
Bisa06g1467 465 FunFam B3 domain-containing protein 143 264 - -
Bisa06g1467 465 SUPERFAMILY DNA-binding pseudobarrel domain 146 240 IPR015300 -
Bisa06g1467 465 MobiDBLite consensus disorder prediction 1 93 - -
Bisa06g1467 465 MobiDBLite consensus disorder prediction 450 465 - -
Bisa06g1467 465 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 9 421 IPR044800 GO:0003700
Bisa06g1467 465 Gene3D - 144 265 IPR015300 -
Bisa06g1467 465 MobiDBLite consensus disorder prediction 74 93 - -
Bisa06g1467 465 CDD B3_DNA 148 237 IPR003340 GO:0003677
Bisa06g1467 465 Pfam B3 DNA binding domain 150 254 IPR003340 GO:0003677
Bisa06g1467 465 MobiDBLite consensus disorder prediction 377 398 - -
Bisa06g1467 465 MobiDBLite consensus disorder prediction 34 62 - -
Bisa06g1467 465 ProSiteProfiles B3 DNA-binding domain profile. 150 255 IPR003340 GO:0003677
Bisa06g1467 465 MobiDBLite consensus disorder prediction 426 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1467 Bisa-ChrBisa06 51398740 51400137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1467 114 413 RAV Transcription Factor Family AT2G46870 51.656 9.11e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa06g1467 B3 3.6e-27 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1467 06 51398740 51400137 Bisa06g1467 06 51398740 51400137 ECH