LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa06g1465	ATGGGGACCCGCTTGATCGGAGATTACATATTGGGACCGCGTATCGGGTCGGGTTCCTTCGCGGTGGTGTGGCGCGCAAGGCATCGTCACTCGGGGTTGGAGGTTGCTGTCAAAGAGATTAACAAGGAACAGCTTAGCCCCAAAGTGAGTGAGAATCTGTTCAAAGAGATTGCTATTCTCAGCACCATCAATCACCCGAACATTATTCGATTATTCGAAGCAATTCAGACCAATAATAGGATTTACCTTGTATTGGAGTATTGCAATGGTGGTGACCTTGCTACTTACATTCAACGGCGTGGAAAAGTTTCAGAATCTATTGCTCGGTATTTCATGAGGCATTTAGCTGCGGGTCTGCAGGTACTTCAAGAAAAGCACCTCATTCACAGAGATTTAAAACCCCAGAACTTACTGTTGTCTATTATTGGAGGCATACCTCTTCTGAAAATAGGGGATTTTGGTTTTGTAAGGTCTCTCACTCCCCAAGGGTTGGCAGACACACTATGTGGTTCACCGTTGTACATGGCTCCAGAGATAATCCGAAGTCAGAAGTACGATGCCAAGGCTGATTTATGGAGTGTTGGAGCAATATTGTTTCAGCTAGTGACTGGGAGGCCACCATTTGATGGAAATACTCAATTCCAGCTTTTTGAGAACATTTTAGCATCCACCGAACTGCAGTTCCCACAAGAGGCTTTAGATGAGCTACATCCTGACTGTTTGGATCTCTGCAGAAGGCTTTTACGACAAAACCCAGTTGAGCGATTAACATTCAGAGAGTTCTTCAATCATGATTTCCTACAGGAGCCCAGGTCAGTTGTGAGTGTTGAGCAGCCTTCTATACTGCCATCAGAAAGATTGATGGTTCAGCAATATGATGGTGTCTCTACCTCTGACAAGATGCCTAAGTTGCATTTTGGGCATCATTTTGAGTCATCTGTGGATGATCCAGTGGTAATTAGTTCAGCTGTTGGTGAGACCATGCTGTTACGAAGAAAGGATAGCAAGAGTGCTGCTGGCACTTGTGTTCAGGGGATAATTTCAACTACTGCTTGTGATAAGCAGGGAGACACTCTTGGTAATGGTGCTCATTCATCAAACCAGCCTCATGTTTCTCCTTTAGTGGAGTCCTTTGAGAAAGATTATGTCCTAGTCAATCCTCATTTTGCATCTTTGGAGGAGGCTTTCTCTGAATATGTTGAGGCGTCTGTGCAAGATAATCACACAAGCAGGGTTTCTATATATCCTTCAAAGGGAGTTGACCTCGAAGTTGGAATGGCAAAGCAAACAAAGGATTTAGTCCCTTGCTATGATGCTGGAGCAGAGAAGTCAAAAAATGATGAACTTAAGGCATCCTCTGTGCTTGCTGTTATGAGGAACATGGAGGGAGTATCCTCACTACAGCCTCCGAGTAGGTTAGAATTGTTGCATCAATATGTGCAAATCCTCACAGAACTTTCCCAAGAGAAATATAATGCAGGACTGTATCTAGAATCATTTGCAGTTGAGCTGGTGGTTTTGGCTATATGGAACAAAGCCCTAGAAGTTTGTAACTCCTGGCTGGTCTCCATCACTGAGGGCGAGATGCCTGGAAGAACTTCAGCAAAAGAAGCGACATTCCCCTGCAGGGATGATGTATGCATATCACAGACCATGGAACAGAAAATAGATTTCAGTGATCCTTCGTCTGTGTCCCTATGGGCCAAGCAAGGGTTTATTTTTGCGGTCGATCATGCAGAGAAAATGTCATCTCATATTCAAAATATGGATGGTGCTGCTGAGATGCCCGATGCTATGGAGATAATATTTCAAAAAGCACTATCAATGGGCACACGTGGTGCTGTAGATGAGTATATGGAGAACAGAGGTAGGGCAGCTACATTATACTCGAAAGCGATGCTTCTACTTTCATTTATTGTGAGAGAAGCAGTGAACCTTCCGCTGAAGCCAACTTTTTCACTAACTCCTGCAAATAAGAAGAGAATTTTACAGTACATTCTCAACCTGCAGTCGCATCAACTTCAGTCTTCATCATCAGATGCTCCTTCTTAG	2052	0.4396	MGTRLIGDYILGPRIGSGSFAVVWRARHRHSGLEVAVKEINKEQLSPKVSENLFKEIAILSTINHPNIIRLFEAIQTNNRIYLVLEYCNGGDLATYIQRRGKVSESIARYFMRHLAAGLQVLQEKHLIHRDLKPQNLLLSIIGGIPLLKIGDFGFVRSLTPQGLADTLCGSPLYMAPEIIRSQKYDAKADLWSVGAILFQLVTGRPPFDGNTQFQLFENILASTELQFPQEALDELHPDCLDLCRRLLRQNPVERLTFREFFNHDFLQEPRSVVSVEQPSILPSERLMVQQYDGVSTSDKMPKLHFGHHFESSVDDPVVISSAVGETMLLRRKDSKSAAGTCVQGIISTTACDKQGDTLGNGAHSSNQPHVSPLVESFEKDYVLVNPHFASLEEAFSEYVEASVQDNHTSRVSIYPSKGVDLEVGMAKQTKDLVPCYDAGAEKSKNDELKASSVLAVMRNMEGVSSLQPPSRLELLHQYVQILTELSQEKYNAGLYLESFAVELVVLAIWNKALEVCNSWLVSITEGEMPGRTSAKEATFPCRDDVCISQTMEQKIDFSDPSSVSLWAKQGFIFAVDHAEKMSSHIQNMDGAAEMPDAMEIIFQKALSMGTRGAVDEYMENRGRAATLYSKAMLLLSFIVREAVNLPLKPTFSLTPANKKRILQYILNLQSHQLQSSSSDAPS	683

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa06g1465	683	ProSiteProfiles	Protein kinase domain profile.	9	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g1465	683	CDD	STKc_ATG1_ULK_like	15	266	-	-
	Bisa06g1465	683	Gene3D	Transferase(Phosphotransferase) domain 1	2	315	-	-
	Bisa06g1465	683	FunFam	Maternal embryonic leucine zipper kinase	3	291	-	-
	Bisa06g1465	683	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	127	139	IPR008271	GO:0004672\|GO:0006468
	Bisa06g1465	683	SUPERFAMILY	Protein kinase-like (PK-like)	5	302	IPR011009	-
	Bisa06g1465	683	ProSitePatterns	Protein kinases ATP-binding region signature.	15	38	IPR017441	GO:0005524
	Bisa06g1465	683	FunFam	Non-specific serine/threonine protein kinase	2	89	-	-
	Bisa06g1465	683	SMART	serkin_6	9	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g1465	683	Pfam	Protein kinase domain	13	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa06g1465	683	PANTHER	SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED	4	562	IPR045269	GO:0004674\|GO:0006914

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa06g1465	Bisa-ChrBisa06	51343864	51349642	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa06g1465	5	260	CBL-interacting serine-threonine protein kinases	AT2G30360	38.168	8.46e-53	186

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-3	Bisa06g1465		Pkinase	2.4e-71	CL0016