Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1447 ATGATGGAGAGGCTTCAAGGACCCATCAATTCCTGTTTCTACGGTGAGCATTTGGAAGGAAATTGTTTTGAGCAAGACTTCATCAATTCAGAGGAAGACGAGCAATTTTATATATCAAGCTTAGAGGATGAAAATATGCCATTTCTACAGATGCTTCAGAGCGTGGAATCCCCACAGCAATATTTTTCCTTCTCTGAGGCAAATTTTCAAACACTTCTAAGGCTACAACACCTGAAGAAACAACAACAACAACCATGGGAAGAAAAGGCCAACGTACCCAGAATGGAGACCCAAATCCAAGCAAAAGAACATGAAAGCTGCGTCACACACGACGTCGTAGATATCCATTCCCCTGTGAAATCCGAAACCAACCAAGACCTTCGTCTGCTTCCTCGTCCAGCTATAATGGTCGAGAAAGAACGACCCAAAGAAACTGAAAACAGCAGCAGAGACCCCAAACGGCGAAAGCGAAAGAGAACGCGACCGGCCAAGAACAAGGAAGAAGTGGAGAACCAGAGAATGACGCACATTGCCGTCGAACGCAACCGGCGACGCCAGATGAACGACCATCTCAGTGTTCTCAGGACCCTCATGCCCCCTTCCTATATTCAAAGGGGTGACCAAGCGTCTATTATCGGAGGTGCAATCGATTTCGTGAAGGAACTGGAGCAACTGCTTCAATCCCTCGAAGCACAAAAGAGGACTAGAAAGAAAGCTGCTTCAAGCGAGATTTTGAAACCATATTACGGAGAAGAAGGAGGAGAAGCAGAGTGTGGTGGGGAAGAAGAGGTGAAGGAGGCGGAGATAGAAGCGACGGTGATTCAAACCCATGTGAACTTGAAGATTCGATGCAGAAGAACACCTGGACAATTGGTGAAAGCCATCGTTGCTTTGGAGGATCATAGGCTTAGTGTTCTGCATCTTAACATCACCTCCTCGCAGGGTTCAGTACTATACTCTTTCAATCTCAAGATAGAGGAAGAGTGTACGCTGGGGTCAGCGAATGAAATAGCAGAAGCAGTTCGTCAAATATTCAGCTTCGTCAGTGGCGGAAGGTAG 1059 0.4655 MMERLQGPINSCFYGEHLEGNCFEQDFINSEEDEQFYISSLEDENMPFLQMLQSVESPQQYFSFSEANFQTLLRLQHLKKQQQQPWEEKANVPRMETQIQAKEHESCVTHDVVDIHSPVKSETNQDLRLLPRPAIMVEKERPKETENSSRDPKRRKRKRTRPAKNKEEVENQRMTHIAVERNRRRQMNDHLSVLRTLMPPSYIQRGDQASIIGGAIDFVKELEQLLQSLEAQKRTRKKAASSEILKPYYGEEGGEAECGGEEEVKEAEIEATVIQTHVNLKIRCRRTPGQLVKAIVALEDHRLSVLHLNITSSQGSVLYSFNLKIEEECTLGSANEIAEAVRQIFSFVSGGR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1447 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 222 IPR011598 GO:0046983
Bisa06g1447 352 PANTHER MAX DIMERIZATION, MAD 93 347 - -
Bisa06g1447 352 MobiDBLite consensus disorder prediction 133 151 - -
Bisa06g1447 352 FunFam Basic helix-loop-helix transcription factor 162 237 - -
Bisa06g1447 352 Coils Coil 219 242 - -
Bisa06g1447 352 MobiDBLite consensus disorder prediction 119 170 - -
Bisa06g1447 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 171 237 IPR036638 GO:0046983
Bisa06g1447 352 CDD bHLH_AtFAMA_like 174 244 - -
Bisa06g1447 352 Pfam Helix-loop-helix DNA-binding domain 172 223 IPR011598 GO:0046983
Bisa06g1447 352 ProSiteProfiles ACT domain profile. 279 352 IPR002912 -
Bisa06g1447 352 Gene3D - 162 239 IPR036638 GO:0046983
Bisa06g1447 352 SMART finulus 177 228 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1447 Bisa-ChrBisa06 50640606 50642858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1447 43 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 45.401 1.65e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa06g1447 HLH 2.6e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1447 06 50640606 50642858 Bisa06g1447 06 50640606 50642858 ECH