Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1429 ATGCTTAGTTCTAATAGCGGAGTATGGAAAGTTGGAAACAGAACTCTCAAAACCCTAGCACACTGCAGACGCGCTGCGAATTGTAGCGATCCACTGCTCTCTGATCTCATCTTCTTGAGTGTAAAAATGTCGTTTGGAGAGCTTGCTTGCAGCTACGCGATTATGATCCTTTATGATGATAACATTCCTGTCACTGCCGAGAAGATCTCAACCATATTGAAAGCGGGAAAAGTTGATGTCGAGTCTTATTGGCCAAGCCTATTTGCAAAACTTGCTGAGAAGCGAGACATTGGGGATTTGATTTTGAATGCTGGAGGCGGTGGGGCTCCAGTTGCTGTTGCAGCAGCCCCAGCTGCTGCTGCCGGTGGAGGTGCTGCCGCTGCCCCTGCTCCCGCTGAGGAGAAGAAGAAGGAAGAGCCCCAGGAAGAGAGTGATGACGACATGGGATTTAGCTTGTTTGACTAG 465 0.4925 MLSSNSGVWKVGNRTLKTLAHCRRAANCSDPLLSDLIFLSVKMSFGELACSYAIMILYDDNIPVTAEKISTILKAGKVDVESYWPSLFAKLAEKRDIGDLILNAGGGGAPVAVAAAPAAAAGGGAAAAPAPAEEKKKEEPQEESDDDMGFSLFD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1429 154 Pfam 60s Acidic ribosomal protein 64 153 - -
Bisa06g1429 154 Gene3D - 43 105 IPR038716 -
Bisa06g1429 154 MobiDBLite consensus disorder prediction 125 154 - -
Bisa06g1429 154 Hamap 50S ribosomal protein L12 [rpl12]. 48 154 IPR027534 GO:0003735|GO:0005840|GO:0006414
Bisa06g1429 154 FunFam 60S acidic ribosomal protein P1 43 105 - -
Bisa06g1429 154 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 43 154 - -
Bisa06g1429 154 CDD Ribosomal_P1 47 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1429 Bisa-ChrBisa06 50024740 50026880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1429 43 154 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 53.509 1.51e-34 115