Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa06g1428 ATGTCTCAGCCAAGGCAATTCCAGACGGTGGGGGGGCAATACAACGACACAACATTCACGAAAATCTTTGTCGGAGGGCTTGCTTGGGAGACTCAAAGGGACACAATGAGGAGGTATTTCGAGCAGTTCGGAGAGATCCTCGAAGCTGTCGTTATCACGGACAAGAACACCGGAAGATCCAAAGGTTACGGCTTTGTTACATTTAAGGATCCAGAGGCTGCCATGCGAGCATGTCAGAACCCATCTCCGGTCATTGATGGAAGAAGAGCAAACTGCAATCTTGCCTCTCTCGGTGCAAACAAGAACCGTCCTCCACCTCCTCTGTTTGGTCCACCAAGGTTCAGAGGATCACCAGCAATGGTGGCTTCCCCTGCATACCATGGCTCTTCCTCTGCCTTTTTCCGTCAACCCACTGGCCAATACGCATTTCCATATTCCTCTTACGGATACTCTGGATATGCACAAGACTCCATGTACCCCATGAACTATTACGGTGTGTATGGAGGTCAACAATTTTCACCATACTATGCGTCCACTGGGGCATCTGGGCCAGCAGGGCTAATCAGTAACATATACCCTTTCTATGGTCACTATGCACAGAGCAATCAGTCCCATGGCTTTGGAGTTCAGTATCCACAAATGGTACAGTTCCCAATTCTTCATCATCAGCAGCCCTATGGTACTACCTCTCCTGGGATTGTGTCATTTCCTTCTTCAATGCCAACTCCAACTTCCAGCGAAGGTGTTGCAGCAACAATAGCAGCAGAGGCGCAGGTAGCACCAGCAGGAGGGTCAGGTGCTTCACAAGCTTCAGTAGTAAAAGCTTCTGAACAAAGCTCCTCATCTTAA 849 0.4912 MSQPRQFQTVGGQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPPPLFGPPRFRGSPAMVASPAYHGSSSAFFRQPTGQYAFPYSSYGYSGYAQDSMYPMNYYGVYGGQQFSPYYASTGASGPAGLISNIYPFYGHYAQSNQSHGFGVQYPQMVQFPILHHQQPYGTTSPGIVSFPSSMPTPTSSEGVAATIAAEAQVAPAGGSGASQASVVKASEQSSSS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa06g1428 282 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 20 97 IPR000504 GO:0003723
Bisa06g1428 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 22 79 IPR000504 GO:0003723
Bisa06g1428 282 SMART rrm1_1 21 93 IPR000504 GO:0003723
Bisa06g1428 282 PANTHER BOULE-RELATED 11 245 - -
Bisa06g1428 282 SUPERFAMILY RNA-binding domain, RBD 14 117 IPR035979 GO:0003676
Bisa06g1428 282 CDD RRM_RBM24_RBM38_like 20 95 - -
Bisa06g1428 282 Gene3D - 1 104 IPR012677 -
Bisa06g1428 282 MobiDBLite consensus disorder prediction 263 282 - -
Bisa06g1428 282 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 14 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa06g1428 Bisa-ChrBisa06 50013434 50015289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa06g1428 16 96 C2H2 Transcription Factor Family AT2G19380 44.444 4.30e-16 76.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g1428 06 50013434 50015289 Bisa06g1428 06 50013434 50015289 ECH